HL_8OVE_029

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAUGGAGU(OMU)C

Length

10 nucleotides

Bulged bases

8OVE|1|AA|G|1650

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|1642
8OVE|1|AA|A|1643
8OVE|1|AA|U|1644
8OVE|1|AA|G|1645
8OVE|1|AA|G|1646
8OVE|1|AA|A|1647
8OVE|1|AA|G|1650
8OVE|1|AA|U|1651
8OVE|1|AA|OMU|1652
8OVE|1|AA|C|1653

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A8

Putative ribosomal protein S29

Chain AI

40S ribosomal protein S15, putative