HL_8OVE_035

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UUGAUCAAAAGA

Length

12 nucleotides

Bulged bases

8OVE|1|AA|U|1993, 8OVE|1|AA|C|1994

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|U|1989
8OVE|1|AA|U|1990
8OVE|1|AA|G|1991
8OVE|1|AA|A|1992
8OVE|1|AA|U|1993
8OVE|1|AA|C|1994
8OVE|1|AA|A|1995
8OVE|1|AA|A|1996
8OVE|1|AA|A|1997
8OVE|1|AA|A|1998
8OVE|1|AA|G|1999
8OVE|1|AA|A|2000

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain AI

40S ribosomal protein S15, putative

Chain AM

40S ribosomal protein S18, putative

Chain AO

Ribosomal protein S19, putative