HL_8OVE_043
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_043 not in the Motif Atlas
- Homologous match to HL_8C3A_003
- Geometric discrepancy: 0.0811
- The information below is about HL_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
8OVE|1|BA|C|93
8OVE|1|BA|G|94
8OVE|1|BA|G|95
8OVE|1|BA|C|96
8OVE|1|BA|G|97
8OVE|1|BA|A|98
8OVE|1|BA|G|99
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain AB
- E-SITE TRNA
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BI
- 60S ribosomal protein L18
- Chain BN
- 60S ribosomal protein L13
- Chain Bb
- 60S ribosomal protein L27a
- Chain Bt
- 60S ribosomal protein L44
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