HL_8OVE_055

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

G(PSU)CUUG(1MA)(A2M)AC(A2M)C

Length

12 nucleotides

Bulged bases

8OVE|1|BA|A|744, 8OVE|1|BA|C|745

QA status

Modified nucleotides: PSU, 1MA, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BA|G|736
8OVE|1|BA|PSU|737
8OVE|1|BA|C|738
8OVE|1|BA|U|739
8OVE|1|BA|U|740
8OVE|1|BA|G|741
8OVE|1|BA|1MA|742
8OVE|1|BA|A2M|743
8OVE|1|BA|A|744
8OVE|1|BA|C|745
8OVE|1|BA|A2M|746
8OVE|1|BA|C|747

Current chains

Chain BA

LUS_alpha rRNA

Nearby chains

Chain BB

Large subunit ribosomal RNA; LSU rRNA

Chain Bb

60S ribosomal protein L27a

Chain Bf

Ribosomal protein L3, mitochondrial, putative

Chain Bi

60S ribosomal protein L32, putative