HL_8OVE_090

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

G(PSU)UACACGACAACGC

Length

15 nucleotides

Bulged bases

8OVE|1|BB|A|1080, 8OVE|1|BB|C|1087

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BB|G|1075
8OVE|1|BB|PSU|1076
8OVE|1|BB|U|1077
8OVE|1|BB|A|1078
8OVE|1|BB|C|1079
8OVE|1|BB|A|1080
8OVE|1|BB|C|1081
8OVE|1|BB|G|1082
8OVE|1|BB|A|1083
8OVE|1|BB|C|1084
8OVE|1|BB|A|1085
8OVE|1|BB|A|1086
8OVE|1|BB|C|1087
8OVE|1|BB|G|1088
8OVE|1|BB|C|1089

Current chains

Chain BB

LSUb rRNA

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BK

60S ribosomal protein L10, putative

Chain BU

60S ribosomal protein L21E, putative

Chain Bd

60S ribosomal protein L29