HL_8OVE_100

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AGUCCGUUUUUUUCU

Length

15 nucleotides

Bulged bases

8OVE|1|BB|U|1495, 8OVE|1|BB|U|1498

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BB|A|1489
8OVE|1|BB|G|1490
8OVE|1|BB|U|1491
8OVE|1|BB|C|1492
8OVE|1|BB|C|1493
8OVE|1|BB|G|1494
8OVE|1|BB|U|1495
8OVE|1|BB|U|1496
8OVE|1|BB|U|1497
8OVE|1|BB|U|1498
8OVE|1|BB|U|1499
8OVE|1|BB|U|1500
8OVE|1|BB|U|1501
8OVE|1|BB|C|1502
8OVE|1|BB|U|1503

Current chains

Chain BB

LSUb rRNA

Nearby chains

Chain BP

40S ribosomal protein L14, putative

Chain Bl

60S ribosomal protein L35A, putative