HL_8OVE_101

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGCAUGUGC

Length

9 nucleotides

Bulged bases

8OVE|1|BB|A|1523, 8OVE|1|BB|U|1524, 8OVE|1|BB|G|1525

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BB|G|1520
8OVE|1|BB|G|1521
8OVE|1|BB|C|1522
8OVE|1|BB|A|1523
8OVE|1|BB|U|1524
8OVE|1|BB|G|1525
8OVE|1|BB|U|1526
8OVE|1|BB|G|1527
8OVE|1|BB|C|1528

Current chains

Chain BB

LSUb rRNA

Nearby chains

Chain BH

SrRNA 4

Chain Bf

Ribosomal protein L3, mitochondrial, putative

Chain Bh

60S ribosomal subunit protein L31, putative