HL_8OVE_103

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AUCAAU(PSU)(OMG)CAGAAUCAUU

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BC|A|68
8OVE|1|BC|U|69
8OVE|1|BC|C|70
8OVE|1|BC|A|71
8OVE|1|BC|A|72
8OVE|1|BC|U|73
8OVE|1|BC|PSU|74
8OVE|1|BC|OMG|75
8OVE|1|BC|C|76
8OVE|1|BC|A|77
8OVE|1|BC|G|78
8OVE|1|BC|A|79
8OVE|1|BC|A|80
8OVE|1|BC|U|86
8OVE|1|BC|C|87
8OVE|1|BC|A|88
8OVE|1|BC|U|89
8OVE|1|BC|U|90

Current chains

Chain BC

5.8S rRNA

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BZ

60S ribosomal protein L26, putative

Chain Bk

60S ribosomal protein L35, putative

Chain Bq

60S ribosomal protein L39, putative