HL_8OVE_110

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GCAC

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8OVE_110 not in the Motif Atlas

Geometric match to HL_8G9Z_001

Geometric discrepancy: 0.0869

The information below is about HL_8G9Z_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8OVE|1|BE|G|154
8OVE|1|BE|C|155
8OVE|1|BE|A|167
8OVE|1|BE|C|168

Current chains

Chain BE

SrRNA 1

Nearby chains

Chain BT

60S ribosomal protein L19, putative

Chain BV

60S ribosomal protein L22, putative

Chain Bp

60S ribosomal protein L38, putative