HL_8OZ0_007
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCGCCGUGCC
- Length
- 11 nucleotides
- Bulged bases
- 8OZ0|1|W|G|385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OZ0_007 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.3618
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OZ0|1|W|G|377
8OZ0|1|W|U|378
8OZ0|1|W|C|379
8OZ0|1|W|G|380
8OZ0|1|W|C|381
8OZ0|1|W|C|382
8OZ0|1|W|G|383
8OZ0|1|W|U|384
8OZ0|1|W|G|385
8OZ0|1|W|C|386
8OZ0|1|W|C|387
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain X
- 40S ribosomal protein S11
- Chain d
- 40S ribosomal protein S8
Coloring options: