HL_8OZ0_016

3D structure

PDB id

8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translation initiation complex with eIF4F and eIF4A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUCUCGGCGGCCCGAAG

Length

17 nucleotides

Bulged bases

8OZ0|1|W|G|751, 8OZ0|1|W|C|791

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OZ0|1|W|C|746
8OZ0|1|W|U|747
8OZ0|1|W|C|748
8OZ0|1|W|U|749
8OZ0|1|W|C|750
8OZ0|1|W|G|751
8OZ0|1|W|G|752
8OZ0|1|W|C|753
8OZ0|1|W|G|788
8OZ0|1|W|G|789
8OZ0|1|W|C|790
8OZ0|1|W|C|791
8OZ0|1|W|C|792
8OZ0|1|W|G|793
8OZ0|1|W|A|794
8OZ0|1|W|A|795
8OZ0|1|W|G|796

Current chains

Chain W

18S rRNA

Nearby chains

Chain L

40S ribosomal protein S7

Chain X

40S ribosomal protein S11

Chain Y

40S ribosomal protein S4, X isoform