HL_8OZ0_044

3D structure

PDB id

8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translation initiation complex with eIF4F and eIF4A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGGACUCUUUCGAGGCCCU

Length

19 nucleotides

Bulged bases

8OZ0|1|W|U|540

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OZ0|1|W|A|533
8OZ0|1|W|G|534
8OZ0|1|W|G|535
8OZ0|1|W|A|536
8OZ0|1|W|C|537
8OZ0|1|W|U|538
8OZ0|1|W|C|539
8OZ0|1|W|U|540
8OZ0|1|W|U|541
8OZ0|1|W|U|542
8OZ0|1|W|C|543
8OZ0|1|W|G|544
8OZ0|1|W|A|545
8OZ0|1|W|G|546
8OZ0|1|W|G|547
8OZ0|1|W|C|548
8OZ0|1|W|C|549
8OZ0|1|W|C|550
8OZ0|1|W|U|551

Current chains

Chain W

18S rRNA

Nearby chains

Chain 7

Eukaryotic translation initiation factor 3 subunit G

Chain I

Eukaryotic translation initiation factor 3 subunit B

Chain Z

40S ribosomal protein S9

Chain b

40S ribosomal protein S30