HL_8P03_030
3D structure
- PDB id
- 8P03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with m6A mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GAC(I2T)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 8P03|1|2|A|1249
- QA status
- Modified nucleotides: I2T
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P03_030 not in the Motif Atlas
- Homologous match to HL_8P9A_215
- Geometric discrepancy: 0.1301
- The information below is about HL_8P9A_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8P03|1|2|G|1241
8P03|1|2|A|1242
8P03|1|2|C|1243
8P03|1|2|I2T|1244
8P03|1|2|C|1245
8P03|1|2|A|1246
8P03|1|2|A|1247
8P03|1|2|C|1248
8P03|1|2|A|1249
8P03|1|2|C|1250
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Transfer RNA; tRNA
- Chain R
- 40S ribosomal protein uS19
- Chain S
- 40S ribosomal protein uS9
- Chain W
- 40S ribosomal protein uS10
- Chain e
- 40S ribosomal protein S29
- Chain j
- Eukaryotic translation initiation factor 4C
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