HL_8P03_037
3D structure
- PDB id
- 8P03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with m6A mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- AUUGCAAUUAUU
- Length
- 12 nucleotides
- Bulged bases
- 8P03|1|2|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P03_037 not in the Motif Atlas
- Homologous match to HL_4V88_219
- Geometric discrepancy: 0.1716
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8P03|1|2|A|1609
8P03|1|2|U|1610
8P03|1|2|U|1611
8P03|1|2|G|1612
8P03|1|2|C|1613
8P03|1|2|A|1614
8P03|1|2|A|1615
8P03|1|2|U|1616
8P03|1|2|U|1617
8P03|1|2|A|1618
8P03|1|2|U|1619
8P03|1|2|U|1620
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain R
- 40S ribosomal protein uS19
- Chain U
- 40S ribosomal protein uS13
- Chain V
- 40S ribosomal protein eS19
- Chain e
- 40S ribosomal protein S29
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