HL_8P16_058

3D structure

PDB id

8P16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

8P16|1|1|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P16_058 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0698

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8P16|1|1|U|2404
8P16|1|1|G|2405
8P16|1|1|A|2406
8P16|1|1|A|2407
8P16|1|1|U|2408
8P16|1|1|G|2409
8P16|1|1|G|2410
8P16|1|1|A|2411
8P16|1|1|A|2412
8P16|1|1|G|2413

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15