HL_8P16_076

3D structure

PDB id

8P16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P16_076 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0676

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8P16|1|2|A|320
8P16|1|2|A|321
8P16|1|2|C|322
8P16|1|2|U|323
8P16|1|2|G|324
8P16|1|2|A|325
8P16|1|2|G|326
8P16|1|2|A|327
8P16|1|2|C|328
8P16|1|2|A|329
8P16|1|2|C|330
8P16|1|2|G|331
8P16|1|2|G|332
8P16|1|2|U|333

Current chains

Chain 2

16S rRNA

Nearby chains

Chain u

Small ribosomal subunit protein bS16

Chain y

Small ribosomal subunit protein bS20