HL_8P16_078

3D structure

PDB id

8P16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P16_078 not in the Motif Atlas

Homologous match to HL_5J7L_010

Geometric discrepancy: 0.0661

The information below is about HL_5J7L_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8P16|1|2|C|379
8P16|1|2|G|380
8P16|1|2|C|381
8P16|1|2|A|382
8P16|1|2|A|383
8P16|1|2|G|384

Current chains

Chain 2

16S rRNA

Nearby chains

Chain u

Small ribosomal subunit protein bS16