HL_8P16_104
3D structure
- PDB id
- 8P16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UGG (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P16_104 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.077
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
8P16|1|5|G|31
8P16|1|5|C|32
8P16|1|5|U|33
8P16|1|5|C|34
8P16|1|5|A|35
8P16|1|5|U|36
8P16|1|5|A|37
8P16|1|5|A|38
8P16|1|5|C|39
Current chains
- Chain 5
- tRNA(fMet)
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain 6
- Peptide chain release factor RF2
- Chain n
- Small ribosomal subunit protein uS9
Coloring options: