HL_8P17_074

3D structure

PDB id

8P17 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

8P17|1|2|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P17_074 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.0782

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8P17|1|2|G|259
8P17|1|2|G|260
8P17|1|2|U|261
8P17|1|2|A|262
8P17|1|2|A|263
8P17|1|2|C|264
8P17|1|2|G|265
8P17|1|2|G|266
8P17|1|2|C|267

Current chains

Chain 2

16S RNA

Nearby chains

Chain v

Small ribosomal subunit protein uS17

Chain y

Small ribosomal subunit protein bS20