HL_8P17_081

3D structure

PDB id

8P17 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P17_081 not in the Motif Atlas

Geometric match to HL_2ZZN_004

Geometric discrepancy: 0.1771

The information below is about HL_2ZZN_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_09452.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

8P17|1|2|G|521
8P17|1|2|C|522
8P17|1|2|A|523
8P17|1|2|G|524
8P17|1|2|C|525
8P17|1|2|C|526
8P17|1|2|G7M|527
8P17|1|2|C|528

Current chains

Chain 2

16S RNA

Nearby chains

Chain 4

mRNA

Chain q

Small ribosomal subunit protein uS12