3D structure

PDB id
8P17 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E167K RF2 on E. coli 70S release complex with UGG (Structure II)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
CCUUGAG
Length
7 nucleotides
Bulged bases
8P17|1|2|U|842
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8P17_086 not in the Motif Atlas
Geometric match to HL_8C3A_022
Geometric discrepancy: 0.383
The information below is about HL_8C3A_022
Detailed Annotation
Externally structured
Broad Annotation
Externally structured
Motif group
HL_96426.1
Basepair signature
cWW-F
Number of instances in this motif group
4

Unit IDs

8P17|1|2|C|840
8P17|1|2|C|841
8P17|1|2|U|842
8P17|1|2|U|843
8P17|1|2|G|844
8P17|1|2|A|845
8P17|1|2|G|846

Current chains

Chain 2
16S RNA

Nearby chains

Chain g
Small ribosomal subunit protein uS2
Chain w
Small ribosomal subunit protein bS18

Coloring options:


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