HL_8P18_013

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

8P18|1|1|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_013 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.0847

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8P18|1|1|G|410
8P18|1|1|G|411
8P18|1|1|A|412
8P18|1|1|C|413
8P18|1|1|C|414
8P18|1|1|A|415
8P18|1|1|U|416
8P18|1|1|C|417

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15