HL_8P18_086

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

8P18|1|2|U|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_086 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3489

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8P18|1|2|C|840
8P18|1|2|C|841
8P18|1|2|U|842
8P18|1|2|U|843
8P18|1|2|G|844
8P18|1|2|A|845
8P18|1|2|G|846

Current chains

Chain 2

16S rRNA

Nearby chains

Chain g

Small ribosomal subunit protein uS2

Chain w

Small ribosomal subunit protein bS18