HL_8P18_093

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

8P18|1|2|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P18_093 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0843

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8P18|1|2|G|1089
8P18|1|2|U|1090
8P18|1|2|U|1091
8P18|1|2|A|1092
8P18|1|2|A|1093
8P18|1|2|G|1094
8P18|1|2|U|1095
8P18|1|2|C|1096

Current chains

Chain 2

16S rRNA

Nearby chains

Chain g

Small ribosomal subunit protein uS2

Chain l

30S ribosomal protein S7

Chain z

Small ribosomal subunit protein bS21