HL_8P2F_013
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- AGCACGUGAAAUU
- Length
- 13 nucleotides
- Bulged bases
- 8P2F|1|A|G|432
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2F_013 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.146
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8P2F|1|A|A|427
8P2F|1|A|G|428
8P2F|1|A|C|429
8P2F|1|A|A|430
8P2F|1|A|C|431
8P2F|1|A|G|432
8P2F|1|A|U|433
8P2F|1|A|G|434
8P2F|1|A|A|435
8P2F|1|A|A|436
8P2F|1|A|A|437
8P2F|1|A|U|438
8P2F|1|A|U|439
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
- Chain D
- Transfer RNA; tRNA
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