HL_8P2F_049
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- GUAAC(3TD)AUAAC
- Length
- 11 nucleotides
- Bulged bases
- 8P2F|1|A|A|1940, 8P2F|1|A|C|1941
- QA status
- Modified nucleotides: 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2F_049 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.2643
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8P2F|1|A|G|1937
8P2F|1|A|U|1938
8P2F|1|A|A|1939
8P2F|1|A|A|1940
8P2F|1|A|C|1941
8P2F|1|A|3TD|1942
8P2F|1|A|A|1943
8P2F|1|A|U|1944
8P2F|1|A|A|1945
8P2F|1|A|A|1946
8P2F|1|A|C|1947
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- Elongation factor G
- Chain F
- Transfer RNA; tRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: