HL_8P2F_074
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2F_074 not in the Motif Atlas
- Homologous match to HL_6ORD_036
- Geometric discrepancy: 0.1877
- The information below is about HL_6ORD_036
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 47
Unit IDs
8P2F|1|D|G|31
8P2F|1|D|C|32
8P2F|1|D|U|33
8P2F|1|D|C|34
8P2F|1|D|A|35
8P2F|1|D|U|36
8P2F|1|D|A|37
8P2F|1|D|A|38
8P2F|1|D|C|39
Current chains
- Chain D
- tRNA
Nearby chains
- Chain F
- Transfer RNA; tRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- mRNA
- Chain h
- 30S ribosomal protein S7
- Chain l
- 30S ribosomal protein S11
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