HL_8P2F_086
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2F_086 not in the Motif Atlas
- Homologous match to HL_5J7L_008
- Geometric discrepancy: 0.091
- The information below is about HL_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8P2F|1|a|A|328
8P2F|1|a|A|329
8P2F|1|a|C|330
8P2F|1|a|U|331
8P2F|1|a|G|332
8P2F|1|a|A|333
8P2F|1|a|G|334
8P2F|1|a|A|335
8P2F|1|a|C|336
8P2F|1|a|A|337
8P2F|1|a|C|338
8P2F|1|a|G|339
8P2F|1|a|G|340
8P2F|1|a|U|341
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain q
- 30S ribosomal protein S16
- Chain u
- 30S ribosomal protein S20
Coloring options: