HL_8P2F_098
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- GAA(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 8P2F|1|a|A|977, 8P2F|1|a|G|980
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2F_098 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.0965
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8P2F|1|a|G|972
8P2F|1|a|A|973
8P2F|1|a|A|974
8P2F|1|a|2MG|975
8P2F|1|a|5MC|976
8P2F|1|a|A|977
8P2F|1|a|A|978
8P2F|1|a|C|979
8P2F|1|a|G|980
8P2F|1|a|C|981
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain E
- Elongation factor G
- Chain F
- Transfer RNA; tRNA
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S13
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