HL_8P2G_029

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

8P2G|1|A|A|1114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_029 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.0939

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8P2G|1|A|C|1108
8P2G|1|A|U|1109
8P2G|1|A|U|1110
8P2G|1|A|A|1111
8P2G|1|A|G|1112
8P2G|1|A|A|1113
8P2G|1|A|A|1114
8P2G|1|A|G|1115
8P2G|1|A|C|1116
8P2G|1|A|A|1117
8P2G|1|A|G|1118

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

Elongation factor G