HL_8P2G_034

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

GCUCGUC

Length

7 nucleotides

Bulged bases

8P2G|1|A|C|1362, 8P2G|1|A|U|1366

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_034 not in the Motif Atlas

Homologous match to HL_7RQB_034

Geometric discrepancy: 0.0559

The information below is about HL_7RQB_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

8P2G|1|A|G|1361
8P2G|1|A|C|1362
8P2G|1|A|U|1363
8P2G|1|A|C|1364
8P2G|1|A|G|1365
8P2G|1|A|U|1366
8P2G|1|A|C|1367

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L17

Chain V

50S ribosomal protein L22