HL_8P2G_039

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

CAUUGUG

Length

7 nucleotides

Bulged bases

8P2G|1|A|U|1581, 8P2G|1|A|U|1582, 8P2G|1|A|U|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_039 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1825

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8P2G|1|A|C|1579
8P2G|1|A|A|1580
8P2G|1|A|U|1581
8P2G|1|A|U|1582
8P2G|1|A|G|1583
8P2G|1|A|U|1584
8P2G|1|A|G|1585

Current chains

Chain A

23S ribosomal RNA

Nearby chains