HL_8P2G_088

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2G_088 not in the Motif Atlas

Geometric match to HL_2ZZN_004

Geometric discrepancy: 0.1451

The information below is about HL_2ZZN_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_09452.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

8P2G|1|a|G|529
8P2G|1|a|C|530
8P2G|1|a|A|531
8P2G|1|a|G|532
8P2G|1|a|C|533
8P2G|1|a|C|534
8P2G|1|a|G7M|535
8P2G|1|a|C|536

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S12