HL_8P2H_055

3D structure

PDB id

8P2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

8P2H|1|A|A|2295, 8P2H|1|A|C|2302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2H_055 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0695

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8P2H|1|A|C|2291
8P2H|1|A|U|2292
8P2H|1|A|A|2293
8P2H|1|A|A|2294
8P2H|1|A|A|2295
8P2H|1|A|A|2296
8P2H|1|A|G|2297
8P2H|1|A|G|2298
8P2H|1|A|U|2299
8P2H|1|A|A|2300
8P2H|1|A|A|2301
8P2H|1|A|C|2302
8P2H|1|A|G|2303

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L16

Chain Z

50S ribosomal protein L27