HL_8P2H_080

3D structure

PDB id

8P2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

UCUUG

Length

5 nucleotides

Bulged bases

8P2H|1|a|U|220

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P2H_080 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2188

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8P2H|1|a|U|218
8P2H|1|a|C|219
8P2H|1|a|U|220
8P2H|1|a|U|221
8P2H|1|a|G|222

Current chains

Chain a

16S ribosomal RNA

Nearby chains