HL_8P2K_098
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUCAG(OMU)ACG
- Length
- 9 nucleotides
- Bulged bases
- 8P2K|1|B5|A|4050
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2K_098 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.1765
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8P2K|1|B5|U|4047
8P2K|1|B5|U|4048
8P2K|1|B5|C|4049
8P2K|1|B5|A|4050
8P2K|1|B5|G|4051
8P2K|1|B5|OMU|4052
8P2K|1|B5|A|4053
8P2K|1|B5|C|4054
8P2K|1|B5|G|4055
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BQ
- eL18
- Chain BT
- 60S ribosomal protein L21
- Chain Ba
- 60S ribosomal protein L27a
- Chain Bo
- eL42
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