HL_8P4V_203
3D structure
- PDB id
- 8P4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with HaterumaimideQ
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- CUAUUUUGUUGGUUUCUAG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P4V_203 not in the Motif Atlas
- Homologous match to HL_8P9A_208
- Geometric discrepancy: 0.0582
- The information below is about HL_8P9A_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8P4V|1|sR|C|827
8P4V|1|sR|U|828
8P4V|1|sR|A|829
8P4V|1|sR|U|830
8P4V|1|sR|U|831
8P4V|1|sR|U|832
8P4V|1|sR|U|833
8P4V|1|sR|G|834
8P4V|1|sR|U|835
8P4V|1|sR|U|836
8P4V|1|sR|G|837
8P4V|1|sR|G|838
8P4V|1|sR|U|839
8P4V|1|sR|U|840
8P4V|1|sR|U|841
8P4V|1|sR|C|842
8P4V|1|sR|U|843
8P4V|1|sR|A|844
8P4V|1|sR|G|845
Current chains
- Chain sR
- 18S ribosomal RNA
Nearby chains
- Chain c1
- 40S ribosomal protein S11-A
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