HL_8P85_083
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 8P85|1|A|C|402, 8P85|1|A|G|403
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P85_083 not in the Motif Atlas
- Geometric match to HL_8P9A_199
- Geometric discrepancy: 0.0712
- The information below is about HL_8P9A_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8P85|1|A|C|393
8P85|1|A|C|394
8P85|1|A|U|395
8P85|1|A|G|396
8P85|1|A|A|397
8P85|1|A|G|398
8P85|1|A|A|399
8P85|1|A|A|400
8P85|1|A|A|401
8P85|1|A|C|402
8P85|1|A|G|403
8P85|1|A|G|404
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4-A
- Chain H
- 40S ribosomal protein S6-A
- Chain J
- 40S ribosomal protein S8-A
- Chain Z
- 40S ribosomal protein S24-A
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