HL_8P85_148
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 8P85|1|AR|C|1846, 8P85|1|AR|G|1848, 8P85|1|AR|A|1850
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P85_148 not in the Motif Atlas
- Geometric match to HL_8P9A_152
- Geometric discrepancy: 0.0353
- The information below is about HL_8P9A_152
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28592.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8P85|1|AR|C|1844
8P85|1|AR|G|1845
8P85|1|AR|C|1846
8P85|1|AR|A|1847
8P85|1|AR|G|1848
8P85|1|AR|C|1849
8P85|1|AR|A|1850
8P85|1|AR|G|1851
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CF
- 60S ribosomal protein L4-A
- Chain CR
- 60S ribosomal protein L17-A
- Chain DL
- 60S ribosomal protein L37-A
- Chain DN
- 60S ribosomal protein L39
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