HL_8P85_189

3D structure

PDB id

8P85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Fluorolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8P85|1|sR|U|232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8P85_189 not in the Motif Atlas

Geometric match to HL_8P9A_194

Geometric discrepancy: 0.0191

The information below is about HL_8P9A_194

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

8P85|1|sR|C|230
8P85|1|sR|U|231
8P85|1|sR|U|232
8P85|1|sR|C|233
8P85|1|sR|G|234
8P85|1|sR|G|235

Current chains

Chain sR

16S ribosomal RNA

Nearby chains