HL_8P8N_022
3D structure
- PDB id
- 8P8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPL39 integrated into the yeast 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CCUCAG
- Length
- 6 nucleotides
- Bulged bases
- 8P8N|1|A|C|959, 8P8N|1|A|A|962
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P8N_022 not in the Motif Atlas
- Homologous match to HL_5TBW_022
- Geometric discrepancy: 0.2311
- The information below is about HL_5TBW_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8P8N|1|A|C|958
8P8N|1|A|C|959
8P8N|1|A|U|960
8P8N|1|A|C|961
8P8N|1|A|A|962
8P8N|1|A|G|963
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain RA
- 60S ribosomal protein L28
- Chain RB
- 60S ribosomal protein L29
- Chain RQ
- 60S ribosomal protein L42-A
Coloring options: