HL_8P9A_012

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGCCUCGGUA

Length

10 nucleotides

Bulged bases

8P9A|1|1|U|545, 8P9A|1|1|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P9A|1|1|U|541
8P9A|1|1|G|542
8P9A|1|1|C|543
8P9A|1|1|C|544
8P9A|1|1|U|545
8P9A|1|1|C|546
8P9A|1|1|G|547
8P9A|1|1|G|548
8P9A|1|1|U|549
8P9A|1|1|A|550

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 0

60S ribosomal protein L20-A