Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_8P9A_0011/1/38:45No text annotation
homologous
HL_8P9A_113
HL_30068.2
HL_8P9A_0021/1/69:74No text annotation
homologous
HL_8P9A_114
HL_53890.2
HL_8P9A_0031/1/90:96No text annotation
homologous
HL_8P9A_115
HL_37369.2
HL_8P9A_0041/1/132:136No text annotation
homologous
HL_8C3A_004
NA
HL_8P9A_0051/1/194:201No text annotation
homologous
HL_8P9A_117
HL_01609.3
HL_8P9A_0061/1/208:212No text annotation
geometric
HL_8C3A_006
NA
HL_8P9A_0071/1/216:224T-loop with unstacked turn
homologous
HL_8C3A_007
NA
HL_8P9A_0081/1/278:287T-loop related
homologous
HL_8P9A_120
HL_77436.5
HL_8P9A_0091/1/303:312No text annotation
homologous
HL_8P9A_121
HL_77600.2
HL_8P9A_0101/1/357:362GNRA
homologous
HL_8P9A_122
HL_37824.7
HL_8P9A_0111/1/382:387GNRA
homologous
HL_8P9A_123
HL_37824.7
HL_8P9A_2261/1/543:548No text annotation
homologous
HL_8P9A_231
HL_13189.1
HL_8P9A_0131/1/599:604GNRA
homologous
HL_8P9A_125
HL_37824.7
HL_8P9A_0141/1/640:649T-loop with 2 stacked bulged bases
homologous
HL_8P9A_126
HL_28252.8
HL_8P9A_0151/1/686:694No text annotation
homologous
HL_8P9A_127
HL_41464.2
HL_8P9A_0161/1/707:712GNRA
homologous
HL_8P9A_128
HL_37824.7
HL_8P9A_0171/1/732:737GNRA
homologous
HL_8P9A_129
HL_37824.7
HL_8P9A_0181/1/763:768No text annotation
homologous
HL_8P9A_130
HL_86870.2
HL_8P9A_0191/1/844:849GNRA
homologous
HL_8P9A_131
HL_37824.7
HL_8P9A_0201/1/876:885No text annotation
homologous
HL_8P9A_132
HL_88205.2
HL_8P9A_0211/1/910:918No text annotation
homologous
HL_8P9A_133
HL_87553.1
HL_8P9A_0221/1/958:963No text annotation
homologous
HL_8P9A_134
HL_70782.2
HL_8P9A_0231/1/1022:1030No text annotation
homologous
HL_8P9A_135
NA
HL_8P9A_0241/1/1076:1083T-loop related
homologous
HL_8P9A_136
HL_77436.5
HL_8P9A_0251/1/1126:1132GNRA
homologous
HL_8P9A_137
HL_37824.7
HL_8P9A_0261/1/1148:1155No text annotation
homologous
HL_8P9A_138
HL_42998.2
HL_8P9A_0271/1/1239:1249No text annotation
geometric
HL_5J7L_143
HL_75660.5
HL_8P9A_0281/1/1347:1357No text annotation
homologous
HL_8P9A_141
HL_29762.1
HL_8P9A_0291/1/1403:1408GNRA
homologous
HL_8P9A_142
HL_37824.7
HL_8P9A_0301/1/1462:1470T-loop with 2 stacked bulged bases
homologous
HL_8P9A_143
HL_28252.8
HL_8P9A_0311/1/1506:1512No text annotation
homologous
HL_8P9A_144
HL_57176.2
HL_8P9A_0321/1/1544:1549GNRA variation
homologous
HL_8C3A_033
NA
HL_8P9A_0331/1/1561:1579No text annotation
HL_8P9A_0341/1/1599:1608No text annotation
homologous
HL_8P9A_146
HL_81545.2
HL_8P9A_0351/1/1634:1639GNRA
homologous
HL_8P9A_147
HL_37824.7
HL_8P9A_0361/1/1680:1688No text annotation
homologous
HL_8P9A_148
HL_77082.1
HL_8P9A_0371/1/1719:1725No text annotation
homologous
HL_8P9A_149
HL_25967.2
HL_8P9A_2271/1/1760:1765No text annotation
homologous
HL_8C3A_039
NA
HL_8P9A_0391/1/1792:1796Mini UNCG
homologous
HL_8P9A_151
HL_48778.2
HL_8P9A_0401/1/1844:1851No text annotation
homologous
HL_8P9A_152
HL_89567.2
HL_8P9A_0411/1/1862:1868GNRA
homologous
HL_8P9A_153
HL_37824.7
HL_8P9A_0421/1/1923:1928UNCG
homologous
HL_8P9A_154
HL_34617.5
HL_8P9A_0431/1/1953:2094No text annotation
homologous
HL_5TBW_044
NA
HL_8P9A_0441/1/2110:2114No text annotation
homologous
HL_8P9A_156
HL_55195.3
HL_8P9A_0451/1/2135:2145No text annotation
homologous
HL_8P9A_157
HL_01962.2
HL_8P9A_0461/1/2164:2170GNRA
homologous
HL_8P9A_158
HL_37824.7
HL_8P9A_0471/1/2220:2225GNRA
homologous
HL_8P9A_159
HL_37824.7
HL_8P9A_0481/1/2253:2263No text annotation
homologous
HL_8C3A_049
NA
HL_8P9A_0491/1/2292:2300No text annotation
homologous
HL_8P9A_161
HL_20167.2
HL_8P9A_0501/1/2369:2378No text annotation
homologous
HL_8P9A_162
HL_61996.2
HL_8P9A_0511/1/2441:2506No text annotation
homologous
HL_5TBW_052
NA
HL_8P9A_0521/1/2534:2545No text annotation
HL_8P9A_2281/1/2568:2573No text annotation
geometric
HL_5TBW_053
NA
HL_8P9A_0541/1/2616:2624No text annotation
homologous
HL_8P9A_165
HL_85367.2
HL_8P9A_0551/1/2633:2645No text annotation
homologous
HL_8P9A_166
HL_91939.2
HL_8P9A_0561/1/2673:2681No text annotation
homologous
HL_8P9A_167
HL_50860.2
HL_8P9A_0571/1/2693:2700Pseudoknot geometry
homologous
HL_8P9A_168
HL_93324.4
HL_8P9A_0581/1/2724:2732No text annotation
homologous
HL_8P9A_169
HL_80599.2
HL_8P9A_0591/1/2744:2749GNRA
homologous
HL_8P9A_170
HL_37824.7
HL_8P9A_0601/1/2776:2784Pseudoknot geometry
homologous
HL_8P9A_171
HL_93324.4
HL_8P9A_0611/1/2840:2848No text annotation
homologous
HL_8P9A_172
HL_32735.2
HL_8P9A_0621/1/2897:2904No text annotation
homologous
HL_8P9A_173
HL_31585.4
HL_8P9A_0631/1/2920:2926No text annotation
homologous
HL_8P9A_174
HL_30068.2
HL_8P9A_0641/1/2963:2968GNRA
homologous
HL_8P9A_175
HL_37824.7
HL_8P9A_0651/1/3025:3030GNRA
homologous
HL_8P9A_176
HL_37824.7
HL_8P9A_0661/1/3068:3073No text annotation
homologous
HL_8P9A_177
HL_65794.5
HL_8P9A_0671/1/3110:3124No text annotation
homologous
HL_8C3A_068
NA
HL_8P9A_0681/1/3194:3197No text annotation
geometric
HL_5TBW_068
NA
HL_8P9A_0691/1/3240:3247No text annotation
homologous
HL_8P9A_180
HL_07886.3
HL_8P9A_0701/1/3303:3311No text annotation
homologous
HL_8P9A_181
HL_64690.6
HL_8P9A_0711/1/3350:3353Mini UNCG
homologous
HL_8P9A_182
HL_48778.2
HL_8P9A_0721/3/32:45No text annotation
geometric
HL_5TBW_238
NA
HL_8P9A_0731/3/36:41No text annotation
homologous
HL_8C3A_073
NA
HL_8P9A_0741/3/88:93GNRA
homologous
HL_8P9A_185
HL_37824.7
HL_8P9A_0751/4/47:56No text annotation
homologous
HL_8P9A_186
HL_93438.2
HL_8P9A_0761/4/69:89No text annotation
homologous
HL_8P4V_073
NA
HL_8P9A_0771/4/108:114No text annotation
homologous
HL_8P9A_188
HL_53890.2
HL_8P9A_0781/4/124:129No text annotation
homologous
HL_8P4V_075
NA
HL_8P9A_0791/A/7:17No text annotation
homologous
HL_8P9A_190
HL_89881.5
HL_8P9A_0801/A/70:81No text annotation
homologous
HL_8P9A_191
HL_81312.1
HL_8P9A_0811/A/154:160GNRA related
homologous
HL_8P9A_192
HL_37824.7
HL_8P9A_2291/A/190:195No text annotation
homologous
HL_8P9A_193
HL_53890.2
HL_8P9A_0831/A/243:250T-loop with 1 bulged base
homologous
HL_8C3A_197
NA
HL_8P9A_0841/A/274:282No text annotation
HL_8P9A_0851/A/330:338GNRA related
homologous
HL_8C3A_199
NA
HL_8P9A_0861/A/368:373No text annotation
homologous
HL_8P9A_198
HL_93535.1
HL_8P9A_0871/A/393:404No text annotation
homologous
HL_8P9A_199
HL_06226.4
HL_8P9A_0881/A/414:419UNCG
homologous
HL_8C3A_202
NA
HL_8P9A_0891/A/450:456No text annotation
homologous
HL_8P9A_201
HL_48417.5
HL_8P9A_0901/A/485:502No text annotation
HL_8P9A_0911/A/520:532No text annotation
homologous
HL_8P9A_203
HL_05304.3
HL_8P9A_0921/A/569:574No text annotation
homologous
HL_8P9A_204
HL_93535.1
HL_8P9A_0931/A/703:735No text annotation
HL_8P9A_0941/A/764:772No text annotation
homologous
HL_8P9A_206
HL_85367.2
HL_8P9A_2301/A/777:783No text annotation
homologous
HL_8P9A_207
HL_48417.5
HL_8P9A_0961/A/825:847No text annotation
HL_8P9A_0971/A/900:909No text annotation
homologous
HL_8C3A_211
NA
HL_8P9A_0981/A/937:942GNRA
homologous
HL_8P9A_210
HL_37824.7
HL_8P9A_0991/A/997:1007No text annotation
homologous
HL_8P9A_211
HL_75293.5
HL_8P9A_1001/A/1055:1064No text annotation
homologous
HL_8P9A_212
HL_97917.2
HL_8P9A_1011/A/1084:1089GNRA
homologous
HL_8P9A_213
HL_37824.7
HL_8P9A_1021/A/1121:1126GNRA
homologous
HL_8C3A_216
NA
HL_8P9A_1031/A/1188:1197No text annotation
homologous
HL_8P9A_215
HL_50779.4
HL_8P9A_1041/A/1238:1247No text annotation
homologous
HL_8P9A_216
HL_81538.2
HL_8P9A_1051/A/1296:1301GNRA
homologous
HL_8C3A_219
NA
HL_8P9A_1061/A/1309:1316T-loop related
homologous
HL_8C3A_220
NA
HL_8P9A_1071/A/1359:1364No text annotation
homologous
HL_8P9A_219
HL_38901.2
HL_8P9A_1081/A/1396:1402No text annotation
homologous
HL_8P9A_220
HL_37369.2
HL_8P9A_1091/A/1501:1506GNRA
homologous
HL_8C3A_223
NA
HL_8P9A_1101/A/1550:1561No text annotation
homologous
HL_8P9A_222
HL_67079.1
HL_8P9A_1111/A/1594:1602No text annotation
homologous
HL_8P9A_223
NA
HL_8P9A_1121/A/1778:1783GNRA variation
homologous
HL_8P9A_225
HL_37824.7
HL_8P9A_1131/AR/38:45No text annotation
HL_30068.2
HL_8P9A_1141/AR/69:74No text annotation
HL_53890.2
HL_8P9A_1151/AR/90:96No text annotation
HL_37369.2
HL_8P9A_1161/AR/132:136No text annotation
HL_32346.4
HL_8P9A_1171/AR/194:201T-loop with 2 stacked bulged bases
HL_01609.3
HL_8P9A_1181/AR/208:212No text annotation
HL_75660.5
HL_8P9A_1191/AR/216:224T-loop with unstacked turn
HL_27670.2
HL_8P9A_1201/AR/278:287T-loop related
HL_77436.5
HL_8P9A_1211/AR/303:312Pseudoknot geometry
HL_77600.2
HL_8P9A_1221/AR/357:362GNRA
HL_37824.7
HL_8P9A_1231/AR/382:387GNRA
HL_37824.7
HL_8P9A_2311/AR/543:548No text annotation
HL_13189.1
HL_8P9A_1251/AR/599:604GNRA
HL_37824.7
HL_8P9A_1261/AR/640:649T-loop with 2 stacked bulged bases
HL_28252.8
HL_8P9A_1271/AR/686:694No text annotation
HL_41464.2
HL_8P9A_1281/AR/707:712GNRA
HL_37824.7
HL_8P9A_1291/AR/732:737GNRA
HL_37824.7
HL_8P9A_1301/AR/763:768No text annotation
HL_86870.2
HL_8P9A_1311/AR/844:849GNRA
HL_37824.7
HL_8P9A_1321/AR/876:885No text annotation
HL_88205.2
HL_8P9A_1331/AR/910:918No text annotation
HL_87553.1
HL_8P9A_1341/AR/958:963Externally structured
HL_70782.2
HL_8P9A_2321/AR/1023:1029GNRA
HL_37824.7
HL_8P9A_1361/AR/1076:1083T-loop related
HL_77436.5
HL_8P9A_1371/AR/1126:1132GNRA
HL_37824.7
HL_8P9A_1381/AR/1148:1155No text annotation
HL_42998.2
HL_8P9A_1391/AR/1239:1249No text annotation
HL_19210.3
HL_8P9A_1401/AR/1267:1274GNRA wlth tandem sheared
HL_81538.2
HL_8P9A_1411/AR/1347:1357No text annotation
HL_29762.1
HL_8P9A_1421/AR/1403:1408GNRA
HL_37824.7
HL_8P9A_1431/AR/1462:1470T-loop with 2 stacked bulged bases
HL_28252.8
HL_8P9A_1441/AR/1506:1512Pseudoknot geometry with 3' bulge
HL_57176.2
HL_8P9A_1451/AR/1544:1549GNRA variation
HL_37824.7
HL_8P9A_1461/AR/1599:1608No text annotation
HL_81545.2
HL_8P9A_1471/AR/1634:1639GNRA
HL_37824.7
HL_8P9A_1481/AR/1680:1688No text annotation
HL_77082.1
HL_8P9A_1491/AR/1719:1725No text annotation
HL_25967.2
HL_8P9A_1501/AR/1759:1766No text annotation
HL_25967.2
HL_8P9A_1511/AR/1792:1796Mini UNCG
HL_48778.2
HL_8P9A_1521/AR/1844:1851No text annotation
HL_89567.2
HL_8P9A_1531/AR/1862:1868GNRA
HL_37824.7
HL_8P9A_1541/AR/1923:1928UNCG
HL_34617.5
HL_8P9A_1561/AR/2110:2114No text annotation
HL_55195.3
HL_8P9A_1571/AR/2135:2145No text annotation
HL_01962.2
HL_8P9A_1581/AR/2164:2170GNRA
HL_37824.7
HL_8P9A_1591/AR/2220:2225GNRA
HL_37824.7
HL_8P9A_1601/AR/2252:2264No text annotation
HL_70658.1
HL_8P9A_1611/AR/2292:2300No text annotation
HL_20167.2
HL_8P9A_1621/AR/2369:2378No text annotation
HL_61996.2
HL_8P9A_1631/AR/2534:2545No text annotation
HL_23509.1
HL_8P9A_2331/AR/2567:2574No text annotation
HL_37344.1
HL_8P9A_1651/AR/2616:2624No text annotation
HL_85367.2
HL_8P9A_1661/AR/2633:2645No text annotation
HL_91939.2
HL_8P9A_1671/AR/2673:2681No text annotation
HL_50860.2
HL_8P9A_1681/AR/2693:2700Pseudoknot geometry
HL_93324.4
HL_8P9A_1691/AR/2724:2732No text annotation
HL_80599.2
HL_8P9A_1701/AR/2744:2749GNRA
HL_37824.7
HL_8P9A_1711/AR/2776:2784Pseudoknot geometry
HL_93324.4
HL_8P9A_1721/AR/2840:2848No text annotation
HL_32735.2
HL_8P9A_1731/AR/2897:2904No text annotation
HL_31585.4
HL_8P9A_1741/AR/2920:2926No text annotation
HL_30068.2
HL_8P9A_1751/AR/2963:2968GNRA
HL_37824.7
HL_8P9A_1761/AR/3025:3030GNRA
HL_37824.7
HL_8P9A_1771/AR/3068:3073Ribsomal LSU H95
HL_65794.5
HL_8P9A_1781/AR/3110:3124No text annotation
HL_74055.2
HL_8P9A_1791/AR/3193:3199No text annotation
HL_08100.1
HL_8P9A_1801/AR/3240:3247No text annotation
HL_07886.3
HL_8P9A_1811/AR/3303:3311No text annotation
HL_64690.6
HL_8P9A_1821/AR/3350:3353Mini UNCG
HL_48778.2
HL_8P9A_1831/AS/32:45No text annotation
HL_13971.1
HL_8P9A_1841/AS/36:41No text annotation
HL_47787.2
HL_8P9A_1851/AS/88:93GNRA
HL_37824.7
HL_8P9A_1861/AT/47:56Pseudoknot with intercalation
HL_93438.2
HL_8P9A_1871/AT/69:89No text annotation
HL_51921.1
HL_8P9A_1881/AT/108:114No text annotation
HL_53890.2
HL_8P9A_1891/AT/124:129No text annotation
HL_86883.1
HL_8P9A_1901/sR/7:17No text annotation
HL_89881.5
HL_8P9A_1911/sR/70:81No text annotation
HL_81312.1
HL_8P9A_1921/sR/154:160GNRA related
HL_37824.7
HL_8P9A_1931/sR/190:195No text annotation
HL_53890.2
HL_8P9A_1941/sR/230:235No text annotation
HL_53890.2
HL_8P9A_1951/sR/243:250T-loop with 1 bulged base
HL_77436.5
HL_8P9A_1961/sR/276:279Mini UNCG
HL_48778.2
HL_8P9A_1971/sR/330:338GNRA related
HL_84299.4
HL_8P9A_1981/sR/368:373No text annotation
HL_93535.1
HL_8P9A_1991/sR/393:404No text annotation
HL_06226.4
HL_8P9A_2001/sR/414:419UNCG
HL_34617.5
HL_8P9A_2011/sR/450:456No text annotation
HL_48417.5
HL_8P9A_2341/sR/486:501No text annotation
HL_64292.1
HL_8P9A_2031/sR/520:532No text annotation
HL_05304.3
HL_8P9A_2041/sR/569:574GNRA variation
HL_93535.1
HL_8P9A_2351/sR/715:723No text annotation
HL_20535.2
HL_8P9A_2061/sR/764:772No text annotation
HL_85367.2
HL_8P9A_2071/sR/777:783No text annotation
HL_48417.5
HL_8P9A_2361/sR/829:843Pseudoknot geometry
HL_88364.2
HL_8P9A_2091/sR/900:909No text annotation
HL_75293.5
HL_8P9A_2101/sR/937:942GNRA
HL_37824.7
HL_8P9A_2111/sR/997:1007No text annotation
HL_75293.5
HL_8P9A_2121/sR/1055:1064No text annotation
HL_97917.2
HL_8P9A_2131/sR/1084:1089GNRA
HL_37824.7
HL_8P9A_2141/sR/1121:1126GNRA
HL_37824.7
HL_8P9A_2151/sR/1188:1197No text annotation
HL_50779.4
HL_8P9A_2161/sR/1238:1247Anticodon loop related
HL_81538.2
HL_8P9A_2171/sR/1296:1301GNRA
HL_37824.7
HL_8P9A_2181/sR/1309:1316T-loop related
HL_77436.5
HL_8P9A_2191/sR/1359:1364No text annotation
HL_38901.2
HL_8P9A_2201/sR/1396:1402GNRA
HL_37369.2
HL_8P9A_2211/sR/1501:1506GNRA
HL_37824.7
HL_8P9A_2221/sR/1550:1561No text annotation
HL_67079.1
HL_8P9A_2241/sR/1691:1710No text annotation
HL_89346.1
HL_8P9A_2251/sR/1778:1783GNRA variation
HL_37824.7

Problematic loops

#loop idProblemSequence
HL_8P9A_012No text annotation
HL_8P9A_038No text annotation
HL_8P9A_053No text annotation
HL_8P9A_082No text annotation
HL_8P9A_095No text annotation
HL_8P9A_124No text annotation
HL_8P9A_135No text annotation
HL_8P9A_155No text annotation
HL_8P9A_164No text annotation
HL_8P9A_202No text annotation
HL_8P9A_205No text annotation
HL_8P9A_208No text annotation
HL_8P9A_223No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_8P9A_0011/1/7:8,
1/4/150:152
Single bulged C
homologous
IL_8C3A_002
NA
IL_8P9A_0021/1/13:15,
1/4/144:145
Single bulged U
homologous
IL_8P9A_232
IL_89505.4
IL_8P9A_0031/1/31:38,
1/1/45:53
No text annotation
homologous
IL_8P9A_234
IL_84694.2
IL_8P9A_0041/1/82:89,
1/1/97:103
No text annotation
homologous
IL_8P9A_235
IL_65594.1
IL_8P9A_0051/1/123:124,
1/1/144:149
No text annotation
homologous
IL_8C3A_007
NA
IL_8P9A_0061/1/125:127,
1/1/141:143
Isolated non-canonical cWW pair
homologous
IL_8C3A_008
NA
IL_8P9A_0071/1/163:165,
1/1/257:258
Single stack bend
homologous
IL_8P9A_238
IL_90729.1
IL_8P9A_0081/1/169:170,
1/1/248:253
No text annotation
geometric
IL_5TBW_010
NA
IL_8P9A_0091/1/177:178,
1/1/238:241
No text annotation
geometric
IL_5TBW_501
NA
IL_8P9A_0101/1/189:191,
1/1/204:205
Single bulged U
homologous
IL_8P9A_241
IL_89505.4
IL_8P9A_0111/1/337:339,
1/4/25:26
Single bulged A
homologous
IL_8P9A_242
IL_31462.6
IL_8P9A_0121/1/376:379,
1/1/390:403
No text annotation
geometric
IL_5TBW_014
NA
IL_8P9A_0131/1/404:410,
1/4/13:19
No text annotation
homologous
IL_8P9A_244
IL_04021.2
IL_8P9A_0141/1/429:431,
1/1/628:630
Isolated non-canonical cWW pair
homologous
IL_8P9A_245
IL_07785.1
IL_8P9A_0151/1/435:495,
1/1/618:624
Kink-turn related
geometric
IL_5TBW_017
NA
IL_8P9A_0161/1/512:513,
1/1/577:579
Single bulged A
homologous
IL_8P9A_246
IL_31462.6
IL_8P9A_0171/1/517:525,
1/1/567:573
No text annotation
homologous
IL_8P9A_247
IL_58126.1
IL_8P9A_0181/1/531:538,
1/1/553:561
No text annotation
homologous
IL_8P9A_248
IL_43858.1
IL_8P9A_0191/1/668:670,
1/1/792:794
Isolated non-canonical cWW pair
homologous
IL_8C3A_023
NA
IL_8P9A_0201/1/680:684,
1/1/696:700
No text annotation
homologous
IL_8P9A_250
IL_74367.1
IL_8P9A_0211/1/725:728,
1/1/741:745
No text annotation
homologous
IL_8P9A_251
IL_23774.1
IL_8P9A_0221/1/752:753,
1/1/779:781
Single bulged A
homologous
IL_8C3A_026
NA
IL_8P9A_0231/1/755:756,
1/1/775:777
Single bulged U
homologous
IL_8P9A_253
IL_89505.4
IL_8P9A_0241/1/758:763,
1/1/768:773
No text annotation
homologous
IL_8P9A_254
IL_85536.2
IL_8P9A_0251/1/803:805,
1/1/938:940
Isolated non-canonical cWW pair
homologous
IL_8P9A_255
IL_87907.2
IL_8P9A_0261/1/805:809,
1/1/931:938
No text annotation
homologous
IL_8P9A_256
IL_54041.2
IL_8P9A_0271/1/833:834,
1/1/859:861
Single bulged G
homologous
IL_8P9A_257
IL_00225.13
IL_8P9A_0281/1/834:838,
1/1/855:859
No text annotation
homologous
IL_8P9A_258
IL_50730.2
IL_8P9A_0291/1/869:872,
1/1/888:890
Major groove platform with extra cWW
homologous
IL_8C3A_034
NA
IL_8P9A_0301/1/873:875,
1/1/886:887
Single bulged U
homologous
IL_8P9A_260
IL_89505.4
IL_8P9A_0311/1/907:909,
1/1/919:923
No text annotation
homologous
IL_8P9A_261
IL_06549.2
IL_8P9A_0321/1/954:956,
1/1/965:967
Isolated non-canonical cWW pair
homologous
IL_8P9A_262
IL_28037.2
IL_8P9A_0331/1/969:970,
1/1/1111:1113
Single stack bend
homologous
IL_8P9A_263
IL_26793.1
IL_8P9A_0341/1/977:981,
1/1/1102:1104
No text annotation
homologous
IL_8P9A_264
IL_25463.1
IL_8P9A_0351/1/983:985,
1/1/1099:1100
Single bulged G
homologous
IL_8P9A_265
IL_00225.13
IL_8P9A_0361/1/991:997,
1/1/1052:1058
No text annotation
homologous
IL_8P9A_266
IL_29198.2
IL_8P9A_0371/1/997:998,
1/1/1050:1052
Minor groove platform
homologous
IL_8P9A_267
IL_51454.3
IL_8P9A_0381/1/999:1004,
1/1/1046:1049
C-loop with bulged stacked A's
homologous
IL_8C3A_043
NA
IL_8P9A_0391/1/1006:1009,
1/1/1041:1044
No text annotation
homologous
IL_8P9A_269
IL_77658.1
IL_8P9A_0401/1/1009:1011,
1/1/1039:1041
Isolated non-canonical cWW pair
homologous
IL_8P9A_270
IL_87907.2
IL_8P9A_0411/1/1014:1018,
1/1/1034:1036
No text annotation
homologous
IL_8P9A_271
IL_11415.1
IL_8P9A_0421/1/1069:1072,
1/1/1086:1089
Tandem non-canonical cWW pairs
geometric
IL_3WBM_002
IL_85033.2
IL_8P9A_0431/1/1074:1076,
1/1/1083:1084
Single bulged A
homologous
IL_8P9A_273
IL_31462.6
IL_8P9A_0441/1/1120:1122,
1/1/1136:1138
Isolated non-canonical cWW pair
homologous
IL_8P9A_274
IL_87907.2
IL_8P9A_0461/1/1167:1171,
1/1/1328:1332
No text annotation
homologous
IL_8P9A_276
IL_38507.2
IL_8P9A_0471/1/1173:1180,
1/1/1325:1326
No text annotation
homologous
IL_8P9A_277
IL_41203.4
IL_8P9A_0481/1/1180:1182,
1/1/1324:1325
Single bulged U
homologous
IL_8P9A_278
IL_89505.4
IL_8P9A_0491/1/1187:1194,
1/1/1314:1319
No text annotation
homologous
IL_8P9A_279
IL_77278.1
IL_8P9A_0501/1/1194:1205,
1/1/1299:1314
No text annotation
homologous
IL_8P9A_280
IL_83149.1
IL_8P9A_0511/1/1207:1209,
1/1/1296:1297
Single bulged U
homologous
IL_8P9A_281
IL_89505.4
IL_8P9A_0521/1/1218:1226,
1/1/1283:1287
No text annotation
homologous
IL_8P9A_282
IL_99692.2
IL_8P9A_0531/1/1230:1234,
1/1/1254:1279
No text annotation
IL_8P9A_0541/1/1230:1238,
1/1/1250:1279
No text annotation
IL_8P9A_0551/1/1234:1238,
1/1/1250:1254
No text annotation
homologous
IL_8P9A_283
IL_16218.2
IL_8P9A_0561/1/1376:1378,
1/1/1428:1431
No text annotation
homologous
IL_8P9A_285
IL_42997.3
IL_8P9A_0571/1/1385:1387,
1/1/1420:1421
Single bulged A
homologous
IL_8P9A_286
IL_31462.6
IL_8P9A_0581/1/1388:1395,
1/1/1415:1419
Kink-turn
homologous
IL_8P9A_287
IL_70923.9
IL_8P9A_0591/1/1398:1400,
1/1/1411:1412
Single bulged A
homologous
IL_8P9A_288
IL_31462.6
IL_8P9A_0601/1/1444:1450,
1/1/2354:2359
No text annotation
homologous
IL_8P9A_289
IL_26307.2
IL_8P9A_0611/1/1501:1505,
1/1/1513:1515
C-loop
homologous
IL_8P9A_290
IL_63596.11
IL_8P9A_0621/1/1532:1536,
1/1/1585:1590
No text annotation
homologous
IL_8P9A_291
IL_38507.2
IL_8P9A_0631/1/1618:1621,
1/1/1824:1826
No text annotation
homologous
IL_8P9A_292
IL_15698.3
IL_8P9A_0641/1/1623:1624,
1/1/1819:1822
Major groove platform related
homologous
IL_8P9A_293
IL_48076.6
IL_8P9A_0651/1/1627:1631,
1/1/1811:1816
No text annotation
homologous
IL_8C3A_072
NA
IL_8P9A_0661/1/1645:1649,
1/1/1806:1810
No text annotation
homologous
IL_8P9A_295
IL_50730.2
IL_8P9A_0671/1/1661:1663,
1/1/1786:1788
Isolated non-canonical cWW pair
homologous
IL_8P9A_296
IL_87907.2
IL_8P9A_0681/1/1669:1670,
1/1/1778:1780
Single bulged C
homologous
IL_8P9A_297
IL_61258.15
IL_8P9A_0691/1/1670:1671,
1/1/1776:1778
Single stack bend
homologous
IL_8C3A_076
NA
IL_8P9A_0701/1/1694:1698,
1/1/1747:1752
No text annotation
homologous
IL_8P9A_299
IL_00981.1
IL_8P9A_0711/1/1702:1707,
1/1/1737:1743
No text annotation
homologous
IL_8P9A_300
IL_23038.1
IL_8P9A_0721/1/1711:1717,
1/1/1727:1733
No text annotation
homologous
IL_8P9A_301
IL_69543.3
IL_8P9A_0731/1/1883:1889,
1/1/2346:2349
No text annotation
homologous
IL_8P9A_302
IL_22829.2
IL_8P9A_0741/1/1895:1897,
1/1/2338:2340
No text annotation
homologous
IL_8P9A_303
IL_67095.2
IL_8P9A_0751/1/1898:1901,
1/1/2336:2337
Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_8P9A_0761/1/1898:1906,
1/1/2333:2337
No text annotation
geometric
IL_5TBW_474
NA
IL_8P9A_0771/1/1901:1906,
1/1/2333:2336
No text annotation
homologous
IL_8P9A_306
IL_76758.2
IL_8P9A_0781/1/1918:1923,
1/1/1928:1934
No text annotation
homologous
IL_8P9A_307
IL_47346.2
IL_8P9A_0791/1/1940:1942,
1/1/2106:2108
Isolated non-canonical cWW pair
homologous
IL_8P9A_308
IL_87907.2
IL_8P9A_0801/1/1947:1948,
1/1/2098:2101
No text annotation
homologous
IL_8P9A_309
IL_73355.1
IL_8P9A_0811/1/1949:1953,
1/1/2094:2097
No text annotation
IL_8P9A_0821/1/2128:2129,
1/1/2323:2325
Single bulged A
homologous
IL_8C3A_087
NA
IL_8P9A_0831/1/2156:2161,
1/1/2173:2180
No text annotation
homologous
IL_8C3A_088
NA
IL_8P9A_0841/1/2196:2199,
1/1/2245:2246
Minor groove platform, major groove intercalation
homologous
IL_8P9A_312
IL_95583.2
IL_8P9A_0851/1/2200:2201,
1/1/2241:2244
Major groove intercalation
homologous
IL_8P9A_313
IL_82107.4
IL_8P9A_0861/1/2204:2206,
1/1/2237:2238
Single bulged U
homologous
IL_8P9A_314
IL_89505.4
IL_8P9A_0871/1/2206:2210,
1/1/2235:2237
No text annotation
homologous
IL_8P9A_315
IL_36516.3
IL_8P9A_0881/1/2211:2217,
1/1/2228:2234
No text annotation
homologous
IL_8P9A_316
IL_88116.2
IL_8P9A_0891/1/2276:2277,
1/1/2307:2310
No text annotation
geometric
IL_8C3A_094
NA
IL_8P9A_0901/1/2277:2288,
1/1/2304:2307
No text annotation
homologous
IL_8P9A_318
IL_42218.2
IL_8P9A_0911/1/2391:2394,
1/1/2986:2988
No text annotation
homologous
IL_8P9A_319
IL_55516.2
IL_8P9A_0921/1/2396:2398,
1/1/2981:2984
No text annotation
homologous
IL_8C3A_097
NA
IL_8P9A_0931/1/2409:2411,
1/1/2811:2812
Single bulged U
homologous
IL_8P9A_321
IL_89505.4
IL_8P9A_0941/1/2412:2413,
1/1/2807:2810
Minor groove platform
homologous
IL_8P9A_322
IL_51454.3
IL_8P9A_0951/1/2423:2425,
1/1/2604:2607
No text annotation
homologous
IL_8P9A_323
IL_85599.2
IL_8P9A_0961/1/2520:2526,
1/1/2584:2587
No text annotation
homologous
IL_8C3A_106
NA
IL_8P9A_0971/1/2614:2615,
1/1/2625:2627
Single bulged A
homologous
IL_8P9A_325
IL_31462.6
IL_8P9A_0981/1/2666:2668,
1/1/2686:2690
No text annotation
homologous
IL_8P9A_326
IL_61476.2
IL_8P9A_0991/1/2718:2721,
1/1/2735:2738
No text annotation
homologous
IL_8P9A_327
IL_85033.2
IL_8P9A_1001/1/2770:2773,
1/1/2787:2788
Single stack bend with bulge
homologous
IL_8P9A_328
IL_90729.1
IL_8P9A_1011/1/2823:2824,
1/1/2865:2867
Major groove platform
homologous
IL_8P9A_329
IL_48076.6
IL_8P9A_1021/1/2824:2826,
1/1/2863:2865
Isolated non-canonical cWW pair
homologous
IL_8P9A_330
IL_87907.2
IL_8P9A_1031/1/2826:2828,
1/1/2862:2863
No text annotation
homologous
IL_8P9A_331
IL_07039.3
IL_8P9A_1041/1/2828:2830,
1/1/2858:2862
No text annotation
homologous
IL_8P9A_332
IL_51387.2
IL_8P9A_1051/1/2835:2839,
1/1/2849:2853
No text annotation
homologous
IL_8P9A_333
IL_17948.2
IL_8P9A_1061/1/2876:2877,
1/1/2949:2951
Major groove platform
homologous
IL_8C3A_115
NA
IL_8P9A_1071/1/2879:2881,
1/1/2943:2947
No text annotation
homologous
IL_8P9A_335
IL_07785.1
IL_8P9A_1081/1/2881:2882,
1/1/2940:2943
No text annotation
homologous
IL_8C3A_117
NA
IL_8P9A_1091/1/2889:2891,
1/1/2912:2914
Isolated non-canonical cWW pair
geometric
IL_5TBW_110
NA
IL_8P9A_1101/1/2889:2892,
1/1/2909:2914
No text annotation
geometric
IL_5TBW_475
NA
IL_8P9A_1111/1/2891:2892,
1/1/2909:2912
No text annotation
homologous
IL_8P9A_339
IL_02555.1
IL_8P9A_1121/1/2918:2920,
1/1/2926:2928
Isolated non-canonical cWW pair
homologous
IL_8P9A_340
IL_87907.2
IL_8P9A_1131/1/2960:2961,
1/1/2970:2972
Single bulged A
geometric
IL_7A0S_002
IL_31462.6
IL_8P9A_1141/1/3004:3007,
1/1/3139:3144
Double sheared
homologous
IL_8P9A_342
IL_09705.15
IL_8P9A_1151/1/3012:3014,
1/1/3040:3042
Isolated non-canonical cWW pair
homologous
IL_8C3A_124
NA
IL_8P9A_1161/1/3018:3025,
1/1/3030:3036
No text annotation
homologous
IL_8P9A_344
IL_04346.10
IL_8P9A_1171/1/3047:3051,
1/1/3091:3094
No text annotation
homologous
IL_8P9A_345
IL_83150.2
IL_8P9A_1181/1/3054:3059,
1/1/3084:3088
No text annotation
homologous
IL_8P9A_346
IL_21001.1
IL_8P9A_1191/1/3063:3064,
1/1/3077:3080
No text annotation
homologous
IL_8P9A_347
NA
IL_8P9A_1201/1/3103:3107,
1/1/3127:3131
No text annotation
homologous
IL_8P9A_348
IL_38507.2
IL_8P9A_1211/1/3163:3166,
1/1/3284:3287
No text annotation
geometric
IL_5TBW_504
NA
IL_8P9A_1221/1/3168:3170,
1/1/3280:3282
Isolated non-canonical cWW pair
homologous
IL_8P9A_350
IL_28037.2
IL_8P9A_1231/1/3177:3179,
1/1/3210:3211
Single bulged A
homologous
IL_8P9A_351
IL_31462.6
IL_8P9A_1241/1/3179:3188,
1/1/3204:3210
No text annotation
homologous
IL_8P9A_352
IL_42231.1
IL_8P9A_1251/1/3193:3194,
1/1/3197:3199
Single bulged U
geometric
IL_5TBW_125
NA
IL_8P9A_1261/1/3225:3229,
1/1/3258:3260
No text annotation
homologous
IL_8P9A_353
IL_82741.2
IL_8P9A_1271/1/3233:3235,
1/1/3252:3254
Isolated non-canonical cWW pair
homologous
IL_8P9A_354
IL_87907.2
IL_8P9A_1281/1/3235:3238,
1/1/3249:3252
No text annotation
homologous
IL_8P9A_355
IL_77658.1
IL_8P9A_1291/1/3300:3303,
1/1/3311:3314
No text annotation
homologous
IL_8P9A_356
IL_77658.1
IL_8P9A_1301/1/3324:3325,
1/1/3381:3383
Single bulged U
homologous
IL_8C3A_137
NA
IL_8P9A_1311/1/3328:3330,
1/1/3373:3378
No text annotation
homologous
IL_8P9A_359
IL_43622.1
IL_8P9A_1321/1/3332:3337,
1/1/3367:3371
No text annotation
homologous
IL_8P9A_360
IL_70411.2
IL_8P9A_1331/1/3340:3342,
1/1/3363:3364
Single bulged U
homologous
IL_8C3A_140
NA
IL_8P9A_1341/1/3342:3345,
1/1/3360:3363
Double sheared; A in syn
homologous
IL_8P9A_362
IL_09705.15
IL_8P9A_1351/1/3348:3350,
1/1/3353:3357
Isolated non-canonical cWW pair
geometric
IL_6CZR_118
NA
IL_8P9A_1361/3/15:16,
1/3/63:65
Single bulged A
homologous
IL_8P9A_364
IL_31462.6
IL_8P9A_1371/3/21:27,
1/3/53:58
No text annotation
homologous
IL_8P9A_365
IL_18487.1
IL_8P9A_1381/3/28:29,
1/3/49:52
No text annotation
homologous
IL_8P9A_366
IL_15052.4
IL_8P9A_1391/3/29:30,
1/3/47:49
Single stack bend
homologous
IL_8P9A_367
IL_90729.1
IL_8P9A_1401/3/32:36,
1/3/41:45
No text annotation
homologous
IL_8P9A_368
IL_58103.11
IL_8P9A_1411/3/72:80,
1/3/100:106
No text annotation
homologous
IL_8P9A_369
IL_04346.10
IL_8P9A_1421/3/84:87,
1/3/94:96
Isolated non-canonical cWW pair
homologous
IL_8P9A_370
IL_87907.2
IL_8P9A_1431/4/64:66,
1/4/93:96
No text annotation
homologous
IL_8P4V_144
NA
IL_8P9A_1441/4/68:69,
1/4/89:91
Single bulged U
homologous
IL_8P4V_145
NA
IL_8P9A_1451/A/24:26,
1/A/600:601
Single bulged C
homologous
IL_8P9A_373
IL_61258.15
IL_8P9A_1461/A/35:37,
1/A/471:473
Isolated non-canonical cWW pair
homologous
IL_8P9A_374
IL_87907.2
IL_8P9A_1471/A/37:41,
1/A/466:471
No text annotation
homologous
IL_8P9A_375
IL_12697.1
IL_8P9A_1481/A/42:48,
1/A/431:433
No text annotation
geometric
IL_4V88_387
NA
IL_8P9A_1491/A/50:52,
1/A/428:429
Minor groove platform
homologous
IL_8P9A_377
IL_51454.3
IL_8P9A_1501/A/58:63,
1/A/87:89
No text annotation
homologous
IL_8P9A_378
IL_61299.4
IL_8P9A_1511/A/64:69,
1/A/82:86
No text annotation
homologous
IL_8P9A_379
IL_21667.1
IL_8P9A_1521/A/109:112,
1/A/302:305
No text annotation
homologous
IL_8P9A_380
IL_77658.1
IL_8P9A_1531/A/113:116,
1/A/300:301
Multiple bulged bases
homologous
IL_8C3A_400
NA
IL_8P9A_1541/A/117:122,
1/A/295:299
No text annotation
homologous
IL_8P9A_382
IL_29223.1
IL_8P9A_1551/A/143:149,
1/A/165:172
No text annotation
homologous
IL_8P9A_383
IL_80604.6
IL_8P9A_1561/A/150:152,
1/A/162:164
No text annotation
homologous
IL_8P9A_384
IL_44465.1
IL_8P9A_1571/A/186:189,
1/A/196:199
Double sheared
homologous
IL_8P9A_385
IL_09705.15
IL_8P9A_1581/A/204:206,
1/A/259:263
No text annotation
homologous
IL_8P9A_386
IL_51387.2
IL_8P9A_1591/A/206:208,
1/A/257:259
Isolated non-canonical cWW pair
homologous
IL_8P9A_387
IL_28037.2
IL_8P9A_1601/A/265:267,
1/A/288:289
Single bulged A
homologous
IL_8P9A_388
IL_31462.6
IL_8P9A_1611/A/270:273,
1/A/283:285
No text annotation
homologous
IL_8P9A_389
IL_15698.3
IL_8P9A_1621/A/311:316,
1/A/348:355
No text annotation
homologous
IL_8P9A_391
IL_46174.3
IL_8P9A_1631/A/318:323,
1/A/345:346
No text annotation
homologous
IL_8P9A_392
IL_47074.2
IL_8P9A_1641/A/363:365,
1/A/376:381
No text annotation
homologous
IL_8C3A_412
NA
IL_8P9A_1651/A/389:391,
1/A/406:408
Isolated cWH basepair
homologous
IL_8P9A_394
IL_10167.6
IL_8P9A_1661/A/411:413,
1/A/420:422
Isolated non-canonical cWW pair
homologous
IL_8C3A_414
NA
IL_8P9A_1671/A/439:441,
1/A/463:464
Single bulged U
homologous
IL_8P9A_396
IL_89505.4
IL_8P9A_1681/A/443:447,
1/A/460:461
No text annotation
homologous
IL_8P9A_397
IL_03109.3
IL_8P9A_1691/A/447:448,
1/A/458:460
Single bulged G
homologous
IL_8P9A_398
IL_00225.13
IL_8P9A_1701/A/517:518,
1/A/533:535
Minor groove platform
homologous
IL_8C3A_501
NA
IL_8P9A_1711/A/518:520,
1/A/532:533
Minor groove platform
homologous
IL_8P9A_401
IL_51454.3
IL_8P9A_1721/A/550:557,
1/A/587:588
No text annotation
homologous
IL_8P9A_402
IL_41203.4
IL_8P9A_1731/A/557:559,
1/A/586:587
Single bulged U
homologous
IL_8C3A_424
NA
IL_8P9A_1741/A/562:568,
1/A/575:583
No text annotation
homologous
IL_8P9A_404
IL_54177.4
IL_8P9A_1751/A/616:622,
1/A/1104:1105
No text annotation
homologous
IL_8P9A_405
IL_38186.6
IL_8P9A_1761/A/624:626,
1/A/973:975
Isolated non-canonical cWW pair
homologous
IL_8P9A_406
IL_87907.2
IL_8P9A_1771/A/627:631,
1/A/968:972
tSH-tHW-tHS
homologous
IL_8C3A_428
NA
IL_8P9A_1781/A/646:648,
1/A/686:688
No text annotation
homologous
IL_8P9A_408
IL_44465.1
IL_8P9A_4651/A/746:747,
1/A/802:805
Major groove minor groove platform; mini C-loop
homologous
IL_8C3A_430
NA
IL_8P9A_1801/A/748:750,
1/A/799:801
Isolated non-canonical cWW pair
homologous
IL_8P9A_413
IL_28037.2
IL_8P9A_1811/A/751:759,
1/A/791:798
No text annotation
homologous
IL_8P9A_414
IL_59049.1
IL_8P9A_1821/A/817:822,
1/A/850:854
Triple non-canonical cWW pairs
geometric
IL_8SP9_002
IL_49751.4
IL_8P9A_1841/A/865:866,
1/A/962:965
Major groove platform; stack outside cWW
geometric
IL_4V88_428
NA
IL_8P9A_1851/A/868:870,
1/A/957:960
Isolated cWH basepair
homologous
IL_8C3A_510
NA
IL_8P9A_1861/A/871:874,
1/A/953:956
No text annotation
homologous
IL_8P9A_419
IL_85033.2
IL_8P9A_1871/A/874:878,
1/A/950:953
No text annotation
homologous
IL_8P9A_420
IL_85033.2
IL_8P9A_1881/A/885:888,
1/A/924:927
No text annotation
homologous
IL_8P9A_421
IL_85033.2
IL_8P9A_1891/A/893:899,
1/A/910:919
No text annotation
homologous
IL_8P9A_422
IL_57741.1
IL_8P9A_1901/A/985:990,
1/A/1014:1016
No text annotation
homologous
IL_8P9A_423
IL_97273.1
IL_8P9A_1911/A/990:994,
1/A/1010:1014
No text annotation
homologous
IL_8P9A_424
IL_17136.7
IL_8P9A_1921/A/1034:1036,
1/A/1095:1101
No text annotation
homologous
IL_8P9A_425
IL_82706.1
IL_8P9A_1931/A/1041:1044,
1/A/1074:1077
No text annotation
homologous
IL_8P9A_426
IL_85033.2
IL_8P9A_1941/A/1049:1053,
1/A/1066:1069
Tandem non-canonical cWW pairs
geometric
IL_3WBM_002
IL_85033.2
IL_8P9A_1951/A/1111:1118,
1/A/1129:1134
No text annotation
homologous
IL_8P9A_428
IL_41756.4
IL_8P9A_1961/A/1146:1147,
1/A/1630:1632
Single bulged A
homologous
IL_8P9A_429
IL_31462.6
IL_8P9A_1971/A/1149:1151,
1/A/1627:1628
Single bulged G
homologous
IL_8P9A_430
IL_00225.13
IL_8P9A_1981/A/1157:1160,
1/A/1617:1621
C-loop
homologous
IL_8C3A_449
NA
IL_8P9A_1991/A/1173:1175,
1/A/1464:1466
Isolated non-canonical cWW pair
homologous
IL_8P9A_432
IL_87907.2
IL_8P9A_2001/A/1178:1179,
1/A/1459:1461
Minor groove platform
homologous
IL_8P9A_433
IL_51454.3
IL_8P9A_2011/A/1213:1215,
1/A/1448:1450
Isolated non-canonical cWW pair
homologous
IL_8C3A_452
NA
IL_8P9A_2021/A/1224:1230,
1/A/1257:1259
No text annotation
IL_8P9A_2031/A/1224:1233,
1/A/1252:1259
No text annotation
IL_8P9A_2041/A/1230:1233,
1/A/1252:1257
No text annotation
IL_8P9A_2051/A/1234:1236,
1/A/1249:1251
No text annotation
homologous
IL_8P9A_436
IL_14688.1
IL_8P9A_2061/A/1268:1270,
1/A/1440:1441
Single bulged U
homologous
IL_8C3A_455
NA
IL_8P9A_2071/A/1272:1278,
1/A/1430:1438
No text annotation
homologous
IL_8P9A_439
IL_86012.1
IL_8P9A_2091/A/1290:1292,
1/A/1323:1325
Isolated non-canonical cWW pair
homologous
IL_8C3A_459
NA
IL_8P9A_2101/A/1306:1308,
1/A/1317:1318
Minor groove platform
homologous
IL_8C3A_460
NA
IL_8P9A_2111/A/1339:1342,
1/A/1383:1385
Isolated non-canonical cWW pair
homologous
IL_8P9A_444
IL_87907.2
IL_8P9A_2121/A/1345:1348,
1/A/1377:1380
No text annotation
homologous
IL_8P9A_445
IL_78800.1
IL_8P9A_2131/A/1352:1354,
1/A/1369:1373
No text annotation
homologous
IL_8C3A_464
NA
IL_8P9A_2141/A/1389:1391,
1/A/1407:1412
Major groove platform; stack outside cWW
geometric
IL_4V88_458
NA
IL_8P9A_4661/A/1480:1487,
1/A/1519:1527
No text annotation
homologous
IL_8P9A_448
IL_91698.1
IL_8P9A_2161/A/1488:1494,
1/A/1513:1518
No text annotation
homologous
IL_8P9A_449
IL_22564.1
IL_8P9A_2171/A/1495:1498,
1/A/1509:1512
No text annotation
homologous
IL_8P9A_450
IL_77658.1
IL_8P9A_2181/A/1540:1545,
1/A/1566:1571
No text annotation
homologous
IL_8P9A_451
IL_85536.2
IL_8P9A_2191/A/1636:1638,
1/A/1764:1767
No text annotation
homologous
IL_8C3A_470
NA
IL_8P9A_2201/A/1638:1641,
1/A/1760:1764
No text annotation
homologous
IL_8P9A_453
IL_65718.4
IL_8P9A_2211/A/1642:1644,
1/A/1757:1759
Isolated non-canonical cWW pair
homologous
IL_8P9A_454
IL_87907.2
IL_8P9A_2221/A/1644:1647,
1/A/1753:1757
No text annotation
homologous
IL_8P9A_455
IL_64231.5
IL_8P9A_2231/A/1650:1652,
1/A/1748:1750
Isolated non-canonical cWW pair
homologous
IL_8C3A_474
NA
IL_8P9A_2241/A/1653:1656,
1/A/1744:1747
Double sheared
homologous
IL_8P9A_457
IL_09705.15
IL_8P9A_2251/A/1656:1658,
1/A/1743:1744
Single bulged U
homologous
IL_8P9A_458
IL_89505.4
IL_8P9A_2261/A/1665:1667,
1/A/1734:1736
Isolated non-canonical cWW pair
homologous
IL_8P9A_459
IL_07785.1
IL_8P9A_2271/A/1669:1672,
1/A/1729:1732
Double sheared
homologous
IL_8P9A_460
IL_09705.15
IL_8P9A_2281/A/1672:1674,
1/A/1727:1729
Isolated non-canonical cWW pair
homologous
IL_8P9A_461
IL_87907.2
IL_8P9A_2291/A/1675:1678,
1/A/1723:1726
No text annotation
homologous
IL_8P9A_462
IL_77658.1
IL_8P9A_2301/A/1678:1682,
1/A/1719:1723
Triple sheared
homologous
IL_8C3A_480
NA
IL_8P9A_2311/AR/7:8,
1/AT/150:152
Single bulged C
IL_61258.15
IL_8P9A_2321/AR/13:15,
1/AT/144:145
Single bulged U
IL_89505.4
IL_8P9A_2331/AR/27:28,
1/AR/56:58
Single stack bend
IL_90729.1
IL_8P9A_2341/AR/31:38,
1/AR/45:53
tSH-tHW-tHH-tHS
IL_84694.2
IL_8P9A_2351/AR/82:89,
1/AR/97:103
8x7 Sarcin-Ricin; G-bulge
IL_65594.1
IL_8P9A_2361/AR/123:124,
1/AR/144:149
No text annotation
IL_92634.2
IL_8P9A_2371/AR/125:127,
1/AR/141:143
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_2381/AR/163:165,
1/AR/257:258
Single stack bend
IL_90729.1
IL_8P9A_2391/AR/169:173,
1/AR/245:253
No text annotation
IL_13358.1
IL_8P9A_4671/AR/175:178,
1/AR/238:243
No text annotation
IL_07469.2
IL_8P9A_2411/AR/189:191,
1/AR/204:205
Single bulged U
IL_89505.4
IL_8P9A_2421/AR/337:339,
1/AT/25:26
Single bulged A
IL_31462.6
IL_8P9A_2431/AR/376:379,
1/AR/390:403
No text annotation
IL_81516.2
IL_8P9A_2441/AR/404:410,
1/AT/13:19
Triple sheared with non-canonical cWW
IL_04021.2
IL_8P9A_2451/AR/429:431,
1/AR/628:630
Isolated non-canonical cWW pair
IL_07785.1
IL_8P9A_2461/AR/512:513,
1/AR/577:579
Single bulged A
IL_31462.6
IL_8P9A_2471/AR/517:525,
1/AR/567:573
No text annotation
IL_58126.1
IL_8P9A_2481/AR/531:538,
1/AR/553:561
No text annotation
IL_43858.1
IL_8P9A_2491/AR/668:670,
1/AR/792:794
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_2501/AR/680:684,
1/AR/696:700
No text annotation
IL_74367.1
IL_8P9A_2511/AR/725:728,
1/AR/741:745
UAA/GAN
IL_23774.1
IL_8P9A_2521/AR/752:753,
1/AR/779:781
Single bulged A
IL_31462.6
IL_8P9A_2531/AR/755:756,
1/AR/775:777
Single bulged U
IL_89505.4
IL_8P9A_2541/AR/758:763,
1/AR/768:773
No text annotation
IL_85536.2
IL_8P9A_2551/AR/803:805,
1/AR/938:940
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_2561/AR/805:809,
1/AR/931:938
tHW-tHW cross-strand stack
IL_54041.2
IL_8P9A_2571/AR/833:834,
1/AR/859:861
Single bulged G
IL_00225.13
IL_8P9A_2581/AR/834:838,
1/AR/855:859
Triple sheared
IL_50730.2
IL_8P9A_2591/AR/869:872,
1/AR/888:890
Major groove platform with extra cWW
IL_51387.2
IL_8P9A_2601/AR/873:875,
1/AR/886:887
Single bulged U
IL_89505.4
IL_8P9A_2611/AR/907:909,
1/AR/919:923
Multiple bulged bases
IL_06549.2
IL_8P9A_2621/AR/954:956,
1/AR/965:967
Isolated non-canonical cWW pair
IL_28037.2
IL_8P9A_2631/AR/969:970,
1/AR/1111:1113
Single stack bend
IL_26793.1
IL_8P9A_2641/AR/977:981,
1/AR/1102:1104
180 degree turn
IL_25463.1
IL_8P9A_2651/AR/983:985,
1/AR/1099:1100
Single bulged G
IL_00225.13
IL_8P9A_2661/AR/991:997,
1/AR/1052:1058
7x7 Sarcin-Ricin with intercalated A; G-bulge
IL_29198.2
IL_8P9A_2671/AR/997:998,
1/AR/1050:1052
Minor groove platform
IL_51454.3
IL_8P9A_2681/AR/999:1004,
1/AR/1046:1049
C-loop
IL_26222.2
IL_8P9A_2691/AR/1006:1009,
1/AR/1041:1044
Tandem non-canonical cWW pairs
IL_77658.1
IL_8P9A_2701/AR/1009:1011,
1/AR/1039:1041
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_2711/AR/1014:1018,
1/AR/1034:1036
No text annotation
IL_11415.1
IL_8P9A_2721/AR/1069:1071,
1/AR/1087:1089
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_2731/AR/1074:1076,
1/AR/1083:1084
Single bulged A
IL_31462.6
IL_8P9A_2741/AR/1120:1122,
1/AR/1136:1138
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_2761/AR/1167:1171,
1/AR/1328:1332
UAA/GAN
IL_38507.2
IL_8P9A_2771/AR/1173:1180,
1/AR/1325:1326
SSU/LSU pseudoknot
IL_41203.4
IL_8P9A_2781/AR/1180:1182,
1/AR/1324:1325
Single bulged U
IL_89505.4
IL_8P9A_2791/AR/1187:1194,
1/AR/1314:1319
No text annotation
IL_77278.1
IL_8P9A_2801/AR/1194:1205,
1/AR/1299:1314
No text annotation
IL_83149.1
IL_8P9A_2811/AR/1207:1209,
1/AR/1296:1297
Single bulged U
IL_89505.4
IL_8P9A_2821/AR/1218:1226,
1/AR/1283:1287
Kink-turn
IL_99692.2
IL_8P9A_2831/AR/1234:1238,
1/AR/1250:1254
No text annotation
IL_16218.2
IL_8P9A_2841/AR/1262:1266,
1/AR/1275:1277
Major groove platform with extra cWW
IL_51387.2
IL_8P9A_2851/AR/1376:1378,
1/AR/1428:1431
No text annotation
IL_42997.3
IL_8P9A_2861/AR/1385:1387,
1/AR/1420:1421
Single bulged A
IL_31462.6
IL_8P9A_2871/AR/1388:1395,
1/AR/1415:1419
Kink-turn
IL_70923.9
IL_8P9A_2881/AR/1398:1400,
1/AR/1411:1412
Single bulged A
IL_31462.6
IL_8P9A_2891/AR/1444:1450,
1/AR/2354:2359
7x6 Sarcin-Ricin; G-bulge
IL_26307.2
IL_8P9A_2901/AR/1501:1505,
1/AR/1513:1515
C-loop
IL_63596.11
IL_8P9A_2911/AR/1532:1536,
1/AR/1585:1590
UAA/GAN
IL_38507.2
IL_8P9A_2921/AR/1618:1621,
1/AR/1824:1826
Other IL
IL_15698.3
IL_8P9A_2931/AR/1623:1624,
1/AR/1819:1822
Major groove platform related
IL_48076.6
IL_8P9A_2941/AR/1627:1631,
1/AR/1811:1816
No text annotation
IL_56317.1
IL_8P9A_2951/AR/1645:1649,
1/AR/1806:1810
Triple sheared
IL_50730.2
IL_8P9A_2961/AR/1661:1663,
1/AR/1786:1788
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_2971/AR/1669:1670,
1/AR/1778:1780
Single bulged C
IL_61258.15
IL_8P9A_2981/AR/1670:1671,
1/AR/1776:1778
Single stack bend
IL_90729.1
IL_8P9A_2991/AR/1694:1698,
1/AR/1747:1752
No text annotation
IL_00981.1
IL_8P9A_3001/AR/1702:1707,
1/AR/1737:1743
No text annotation
IL_23038.1
IL_8P9A_3011/AR/1711:1717,
1/AR/1727:1733
Kink-turn
IL_69543.3
IL_8P9A_3021/AR/1883:1889,
1/AR/2346:2349
No text annotation
IL_22829.2
IL_8P9A_3031/AR/1895:1897,
1/AR/2338:2340
No text annotation
IL_67095.2
IL_8P9A_3041/AR/1898:1901,
1/AR/2336:2337
Major groove platform; stack outside cWW
IL_50694.7
IL_8P9A_3051/AR/1898:1906,
1/AR/2333:2337
No text annotation
IL_22854.4
IL_8P9A_3061/AR/1901:1906,
1/AR/2333:2336
No text annotation
IL_76758.2
IL_8P9A_3071/AR/1918:1923,
1/AR/1928:1934
tSH-tSH-tHH-tHS
IL_47346.2
IL_8P9A_3081/AR/1940:1942,
1/AR/2106:2108
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_3091/AR/1947:1948,
1/AR/2098:2101
No text annotation
IL_73355.1
IL_8P9A_3101/AR/2128:2129,
1/AR/2323:2325
Single bulged A
IL_31462.6
IL_8P9A_3111/AR/2156:2161,
1/AR/2173:2180
Kink-turn related
IL_20047.1
IL_8P9A_3121/AR/2196:2199,
1/AR/2245:2246
Minor groove platform, major groove intercalation
IL_95583.2
IL_8P9A_3131/AR/2200:2201,
1/AR/2241:2244
Major groove intercalation
IL_82107.4
IL_8P9A_3141/AR/2204:2206,
1/AR/2237:2238
Single bulged U
IL_89505.4
IL_8P9A_3151/AR/2206:2210,
1/AR/2235:2237
Major groove platform with extra pair
IL_36516.3
IL_8P9A_3161/AR/2211:2217,
1/AR/2228:2234
No text annotation
IL_88116.2
IL_8P9A_3171/AR/2276:2277,
1/AR/2307:2310
No text annotation
IL_22551.4
IL_8P9A_3181/AR/2277:2288,
1/AR/2304:2307
No text annotation
IL_42218.2
IL_8P9A_3191/AR/2391:2394,
1/AR/2986:2988
Major groove platform with extra pair
IL_55516.2
IL_8P9A_3201/AR/2396:2398,
1/AR/2981:2984
Major groove platform with intercalation
IL_83389.2
IL_8P9A_3211/AR/2409:2411,
1/AR/2811:2812
Single bulged U
IL_89505.4
IL_8P9A_3221/AR/2412:2413,
1/AR/2807:2810
Minor groove platform
IL_51454.3
IL_8P9A_3231/AR/2423:2425,
1/AR/2604:2607
Isolated tHS basepair with bulges
IL_85599.2
IL_8P9A_3241/AR/2520:2526,
1/AR/2584:2587
No text annotation
IL_00555.1
IL_8P9A_3251/AR/2614:2615,
1/AR/2625:2627
Single bulged A
IL_31462.6
IL_8P9A_3261/AR/2666:2668,
1/AR/2686:2690
Isolated tHS basepair with bulges
IL_61476.2
IL_8P9A_3271/AR/2718:2721,
1/AR/2735:2738
Tandem non-canonical cWW pairs
IL_85033.2
IL_8P9A_3281/AR/2770:2773,
1/AR/2787:2788
Single stack bend with bulge
IL_90729.1
IL_8P9A_3291/AR/2823:2824,
1/AR/2865:2867
Major groove platform
IL_48076.6
IL_8P9A_3301/AR/2824:2826,
1/AR/2863:2865
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_3311/AR/2826:2828,
1/AR/2862:2863
Major groove platform
IL_07039.3
IL_8P9A_3321/AR/2828:2830,
1/AR/2858:2862
Major groove minor groove platform with extra cWW
IL_51387.2
IL_8P9A_3331/AR/2835:2839,
1/AR/2849:2853
Triple sheared
IL_17948.2
IL_8P9A_3341/AR/2876:2877,
1/AR/2949:2951
Major groove platform
IL_07039.3
IL_8P9A_3351/AR/2879:2881,
1/AR/2943:2947
Isolated non-canonical cWW with bulges
IL_07785.1
IL_8P9A_3361/AR/2881:2882,
1/AR/2940:2943
Multiple bulged bases
IL_42626.2
IL_8P9A_3371/AR/2889:2891,
1/AR/2912:2914
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_3381/AR/2889:2892,
1/AR/2909:2914
No text annotation
IL_07469.2
IL_8P9A_3391/AR/2891:2892,
1/AR/2909:2912
Major groove platform with intercalation
IL_02555.1
IL_8P9A_3401/AR/2918:2920,
1/AR/2926:2928
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_3411/AR/2960:2961,
1/AR/2970:2972
Single bulged A
IL_31462.6
IL_8P9A_3421/AR/3004:3007,
1/AR/3139:3144
Double sheared
IL_09705.15
IL_8P9A_3431/AR/3012:3014,
1/AR/3040:3042
Isolated non-canonical cWW pair
IL_28037.2
IL_8P9A_3441/AR/3018:3025,
1/AR/3030:3036
8x7 Sarcin-Ricin; G-bulge
IL_04346.10
IL_8P9A_3451/AR/3047:3051,
1/AR/3091:3094
Major groove minor groove platform with tHH
IL_83150.2
IL_8P9A_3461/AR/3054:3059,
1/AR/3084:3088
UAA/GAN related
IL_21001.1
IL_8P9A_3481/AR/3103:3107,
1/AR/3127:3131
UAA/GAN
IL_38507.2
IL_8P9A_3491/AR/3162:3166,
1/AR/3284:3288
Partly complementary
IL_49751.4
IL_8P9A_3501/AR/3168:3170,
1/AR/3280:3282
Isolated non-canonical cWW pair
IL_28037.2
IL_8P9A_3511/AR/3177:3179,
1/AR/3210:3211
Single bulged A
IL_31462.6
IL_8P9A_3521/AR/3179:3188,
1/AR/3204:3210
No text annotation
IL_42231.1
IL_8P9A_3531/AR/3225:3229,
1/AR/3258:3260
No text annotation
IL_82741.2
IL_8P9A_3541/AR/3233:3235,
1/AR/3252:3254
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_3551/AR/3235:3238,
1/AR/3249:3252
Tandem non-canonical cWW pairs
IL_77658.1
IL_8P9A_3561/AR/3300:3303,
1/AR/3311:3314
Tandem non-canonical cWW pairs
IL_77658.1
IL_8P9A_3571/AR/3318:3320,
1/AR/3387:3388
Single bulged U
IL_89505.4
IL_8P9A_3581/AR/3324:3325,
1/AR/3381:3383
Single bulged U
IL_89505.4
IL_8P9A_3591/AR/3328:3330,
1/AR/3373:3378
Isolated non-canonical cWW pair
IL_43622.1
IL_8P9A_3601/AR/3332:3337,
1/AR/3367:3371
No text annotation
IL_70411.2
IL_8P9A_3611/AR/3340:3342,
1/AR/3363:3364
Single bulged U
IL_89505.4
IL_8P9A_3621/AR/3342:3345,
1/AR/3360:3363
Double sheared; A in syn
IL_09705.15
IL_8P9A_3631/AR/3349:3350,
1/AR/3353:3356
Multiple bulged bases
IL_84476.1
IL_8P9A_3641/AS/15:16,
1/AS/63:65
Single bulged A
IL_31462.6
IL_8P9A_3651/AS/21:27,
1/AS/53:58
Minor groove platform related
IL_18487.1
IL_8P9A_3661/AS/28:29,
1/AS/49:52
Minor groove platform
IL_15052.4
IL_8P9A_3671/AS/29:30,
1/AS/47:49
Single stack bend
IL_90729.1
IL_8P9A_3681/AS/32:36,
1/AS/41:45
Symmetric double minor groove platform
IL_58103.11
IL_8P9A_3691/AS/72:80,
1/AS/100:106
8x7 Sarcin-Ricin; G-bulge
IL_04346.10
IL_8P9A_3701/AS/84:87,
1/AS/94:96
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_3711/AT/64:66,
1/AT/93:96
No text annotation
IL_07785.1
IL_8P9A_3721/AT/68:69,
1/AT/89:91
Single bulged U
IL_89505.4
IL_8P9A_3731/sR/24:26,
1/sR/600:601
Single bulged C
IL_61258.15
IL_8P9A_3741/sR/35:37,
1/sR/471:473
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_3751/sR/37:41,
1/sR/466:471
Triple sheared related
IL_12697.1
IL_8P9A_3761/sR/42:48,
1/sR/431:433
No text annotation
IL_88082.1
IL_8P9A_3771/sR/50:52,
1/sR/428:429
Minor groove platform
IL_51454.3
IL_8P9A_3781/sR/58:63,
1/sR/87:89
No text annotation
IL_61299.4
IL_8P9A_3791/sR/64:69,
1/sR/82:86
No text annotation
IL_21667.1
IL_8P9A_3801/sR/109:112,
1/sR/302:305
Tandem non-canonical cWW pairs
IL_77658.1
IL_8P9A_3811/sR/113:116,
1/sR/300:301
Multiple bulged bases
IL_82107.4
IL_8P9A_3821/sR/117:122,
1/sR/295:299
No text annotation
IL_29223.1
IL_8P9A_3831/sR/143:149,
1/sR/165:172
tWH-tWH-tHW-tHW
IL_80604.6
IL_8P9A_3841/sR/150:152,
1/sR/162:164
Isolated non-canonical cWW contact
IL_44465.1
IL_8P9A_3851/sR/186:189,
1/sR/196:199
Double sheared
IL_09705.15
IL_8P9A_3861/sR/204:206,
1/sR/259:263
Major groove platform with extra cWW
IL_51387.2
IL_8P9A_3871/sR/206:208,
1/sR/257:259
Isolated non-canonical cWW pair
IL_28037.2
IL_8P9A_3881/sR/265:267,
1/sR/288:289
Single bulged A
IL_31462.6
IL_8P9A_3891/sR/270:273,
1/sR/283:285
No text annotation
IL_15698.3
IL_8P9A_3901/sR/275:276,
1/sR/279:281
Single bulged U
IL_89505.4
IL_8P9A_3911/sR/311:316,
1/sR/348:355
Kink-turn with non-sequential stacking
IL_46174.3
IL_8P9A_3921/sR/318:323,
1/sR/345:346
No text annotation
IL_47074.2
IL_8P9A_3931/sR/363:365,
1/sR/376:381
No text annotation
IL_73789.1
IL_8P9A_3941/sR/389:391,
1/sR/406:408
Isolated cWH basepair
IL_10167.6
IL_8P9A_3951/sR/411:413,
1/sR/420:422
Isolated near basepair
IL_42997.3
IL_8P9A_3961/sR/439:441,
1/sR/463:464
Single bulged U
IL_89505.4
IL_8P9A_3971/sR/443:447,
1/sR/460:461
No text annotation
IL_03109.3
IL_8P9A_3981/sR/447:448,
1/sR/458:460
Single bulged G
IL_00225.13
IL_8P9A_3991/sR/481:482,
1/sR/505:507
Single bulged A
IL_31462.6
IL_8P9A_4001/sR/516:518,
1/sR/533:536
No text annotation
IL_90351.1
IL_8P9A_4011/sR/518:520,
1/sR/532:533
Minor groove platform
IL_51454.3
IL_8P9A_4021/sR/550:557,
1/sR/587:588
SSU/LSU pseudoknot
IL_41203.4
IL_8P9A_4031/sR/557:559,
1/sR/586:587
Single bulged U
IL_89505.4
IL_8P9A_4041/sR/562:568,
1/sR/575:583
Kink-turn related
IL_54177.4
IL_8P9A_4051/sR/616:622,
1/sR/1104:1105
No text annotation
IL_38186.6
IL_8P9A_4061/sR/624:626,
1/sR/973:975
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_4071/sR/627:631,
1/sR/968:972
tSH-tHW-tHS
IL_17136.7
IL_8P9A_4081/sR/646:648,
1/sR/686:688
Isolated non-canonical cWW pair
IL_44465.1
IL_8P9A_4091/sR/649:655,
1/sR/675:685
No text annotation
IL_73002.1
IL_8P9A_4101/sR/703:708,
1/sR/730:735
Triple sheared related
IL_85536.2
IL_8P9A_4111/sR/709:712,
1/sR/726:729
Tandem non-canonical cWW pairs
IL_77658.1
IL_8P9A_4121/sR/746:747,
1/sR/802:805
Major groove minor groove platform; mini C-loop
IL_68140.4
IL_8P9A_4131/sR/748:750,
1/sR/799:801
Isolated non-canonical cWW pair
IL_28037.2
IL_8P9A_4141/sR/751:759,
1/sR/791:798
No text annotation
IL_59049.1
IL_8P9A_4151/sR/819:822,
1/sR/850:852
Isolated non-canonical cWW pair
IL_07785.1
IL_8P9A_4171/sR/865:866,
1/sR/962:965
Major groove platform; stack outside cWW
IL_50694.7
IL_8P9A_4181/sR/868:870,
1/sR/957:960
Isolated non-canonical cWW pair
IL_57744.1
IL_8P9A_4191/sR/871:874,
1/sR/953:956
Tandem non-canonical cWW pairs
IL_85033.2
IL_8P9A_4201/sR/874:878,
1/sR/950:953
Tandem non-canonical cWW pairs
IL_85033.2
IL_8P9A_4211/sR/885:888,
1/sR/924:927
Tandem non-canonical cWW pairs
IL_85033.2
IL_8P9A_4221/sR/893:899,
1/sR/910:919
No text annotation
IL_57741.1
IL_8P9A_4231/sR/985:990,
1/sR/1014:1016
Other IL
IL_97273.1
IL_8P9A_4241/sR/990:994,
1/sR/1010:1014
tSH-tHW-tHS
IL_17136.7
IL_8P9A_4251/sR/1034:1036,
1/sR/1095:1101
No text annotation
IL_82706.1
IL_8P9A_4261/sR/1041:1044,
1/sR/1074:1077
Tandem non-canonical cWW pairs
IL_85033.2
IL_8P9A_4271/sR/1051:1053,
1/sR/1066:1067
Single bulged U
IL_89505.4
IL_8P9A_4281/sR/1111:1118,
1/sR/1129:1134
8x6 Sarcin-Ricin with inserted Y; G-bulge
IL_41756.4
IL_8P9A_4291/sR/1146:1147,
1/sR/1630:1632
Single bulged A
IL_31462.6
IL_8P9A_4301/sR/1149:1151,
1/sR/1627:1628
Single bulged G
IL_00225.13
IL_8P9A_4311/sR/1157:1160,
1/sR/1617:1621
C-loop
IL_63596.11
IL_8P9A_4321/sR/1173:1175,
1/sR/1464:1466
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_4331/sR/1178:1179,
1/sR/1459:1461
Minor groove platform
IL_51454.3
IL_8P9A_4341/sR/1213:1215,
1/sR/1448:1450
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_4701/sR/1224:1233,
1/sR/1252:1259
Kink-turn
IL_28304.1
IL_8P9A_4361/sR/1234:1236,
1/sR/1249:1251
No text annotation
IL_14688.1
IL_8P9A_4371/sR/1268:1270,
1/sR/1440:1441
Single bulged U
IL_89505.4
IL_8P9A_4381/sR/1272:1276,
1/sR/1436:1438
Isolated cWS basepair
IL_76319.5
IL_8P9A_4391/sR/1272:1278,
1/sR/1430:1438
No text annotation
IL_86012.1
IL_8P9A_4401/sR/1276:1278,
1/sR/1430:1436
Minor groove platform with extra cWW
IL_49061.1
IL_8P9A_4411/sR/1280:1281,
1/sR/1426:1428
Single bulged A
IL_31462.6
IL_8P9A_4421/sR/1290:1292,
1/sR/1323:1325
Isolated cWH basepair
IL_10167.6
IL_8P9A_4431/sR/1306:1308,
1/sR/1317:1318
Minor groove platform
IL_51454.3
IL_8P9A_4441/sR/1339:1342,
1/sR/1383:1385
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_4451/sR/1345:1348,
1/sR/1377:1380
Minor groove platform
IL_78800.1
IL_8P9A_4711/sR/1352:1354,
1/sR/1369:1373
Isolated non-canonical cWW pair
IL_07785.1
IL_8P9A_4471/sR/1389:1391,
1/sR/1407:1412
Major groove platform; stack outside cWW
IL_94684.1
IL_8P9A_4481/sR/1480:1487,
1/sR/1519:1527
No text annotation
IL_91698.1
IL_8P9A_4491/sR/1488:1494,
1/sR/1513:1518
180 degree turn
IL_22564.1
IL_8P9A_4501/sR/1495:1498,
1/sR/1509:1512
Tandem non-canonical cWW pairs
IL_77658.1
IL_8P9A_4511/sR/1540:1545,
1/sR/1566:1571
No text annotation
IL_85536.2
IL_8P9A_4521/sR/1636:1638,
1/sR/1764:1767
No text annotation
IL_61438.4
IL_8P9A_4531/sR/1638:1641,
1/sR/1760:1764
No text annotation
IL_65718.4
IL_8P9A_4541/sR/1642:1644,
1/sR/1757:1759
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_4551/sR/1644:1647,
1/sR/1753:1757
Non canonical cWW and near pair
IL_64231.5
IL_8P9A_4561/sR/1650:1652,
1/sR/1748:1750
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_4571/sR/1653:1656,
1/sR/1744:1747
Double sheared
IL_09705.15
IL_8P9A_4581/sR/1656:1658,
1/sR/1743:1744
Single bulged U
IL_89505.4
IL_8P9A_4591/sR/1665:1667,
1/sR/1734:1736
Isolated non-canonical cWW pair
IL_07785.1
IL_8P9A_4601/sR/1669:1672,
1/sR/1729:1732
Double sheared
IL_09705.15
IL_8P9A_4611/sR/1672:1674,
1/sR/1727:1729
Isolated non-canonical cWW pair
IL_87907.2
IL_8P9A_4621/sR/1675:1678,
1/sR/1723:1726
Tandem non-canonical cWW pairs
IL_77658.1
IL_8P9A_4631/sR/1678:1682,
1/sR/1719:1723
Triple sheared
IL_50730.2
IL_8P9A_4641/sR/1688:1690,
1/sR/1711:1713
Isolated tWW contact
IL_10167.6

Problematic loops

#loop idProblemSequence
IL_8P9A_045No text annotation
IL_8P9A_179Major groove minor groove platform with extra cWW
IL_8P9A_183Isolated cWH basepair
IL_8P9A_208Single bulged A
IL_8P9A_215No text annotation
IL_8P9A_240No text annotation
IL_8P9A_275No text annotation
IL_8P9A_347Multiple bulged bases
IL_8P9A_468Tandem non-canonical cWW pairs
IL_8P9A_416No text annotation
IL_8P9A_469Isolated non-canonical cWW pair
IL_8P9A_435No text annotation
IL_8P9A_446No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_8P9A_0011/1/113:123,
1/1/149:158,
1/1/263:267
No text annotation
homologous
J3_8P9A_042
J3_19664.1
J3_8P9A_0021/1/113:124,
1/1/144:158,
1/1/263:267
No text annotation
J3_8P9A_0031/1/185:189,
1/1/205:214,
1/1/226:231
No text annotation
homologous
J3_8P9A_044
J3_75408.1
J3_8P9A_0041/1/340:356,
1/1/363:368,
1/4/21:24
No text annotation
homologous
J3_8P9A_045
J3_30040.2
J3_8P9A_0051/1/369:376,
1/1/403:404,
1/4/19:20
No text annotation
geometric
J3_5TBW_002
NA
J3_8P9A_0061/1/369:379,
1/1/390:404,
1/4/19:20
No text annotation
homologous
J3_8P9A_047
J3_92134.2
J3_8P9A_0071/1/502:503,
1/1/588:597,
1/1/606:611
No text annotation
homologous
J3_8P9A_048
J3_83726.1
J3_8P9A_0081/1/814:820,
1/1/905:907,
1/1/923:926
No text annotation
homologous
J3_8P9A_049
J3_64189.2
J3_8P9A_0091/1/828:831,
1/1/863:867,
1/1/892:897
No text annotation
homologous
J3_8P9A_050
J3_21998.1
J3_8P9A_0101/1/986:987,
1/1/1062:1066,
1/1/1092:1098
No text annotation
homologous
J3_8P9A_051
J3_09667.1
J3_8P9A_0111/1/1479:1485,
1/1/1857:1859,
1/1/1871:1874
No text annotation
homologous
J3_8P9A_053
J3_19545.2
J3_8P9A_0121/1/1488:1491,
1/1/1837:1843,
1/1/1852:1854
No text annotation
homologous
J3_8P9A_054
J3_19545.2
J3_8P9A_0131/1/1526:1531,
1/1/1591:1595,
1/1/1612:1613
No text annotation
homologous
J3_8P9A_055
J3_31965.2
J3_8P9A_0141/1/1537:1542,
1/1/1551:1561,
1/1/1579:1584
No text annotation
J3_8P9A_0851/1/1631:1632,
1/1/1641:1645,
1/1/1810:1811
No text annotation
homologous
J3_8P9A_087
J3_75962.2
J3_8P9A_0161/1/1654:1658,
1/1/1791:1792,
1/1/1796:1801
No text annotation
homologous
J3_8P9A_058
J3_12393.2
J3_8P9A_0171/1/2432:2435,
1/1/2512:2517,
1/1/2590:2597
No text annotation
homologous
J3_8P9A_059
J3_84052.1
J3_8P9A_0181/1/2529:2533,
1/1/2546:2563,
1/1/2578:2581
No text annotation
J3_8P9A_0191/1/2651:2653,
1/1/2754:2765,
1/1/2793:2798
No text annotation
homologous
J3_8P9A_061
J3_20992.1
J3_8P9A_0201/1/2664:2666,
1/1/2690:2692,
1/1/2701:2706
No text annotation
homologous
J3_8P9A_062
J3_61124.2
J3_8P9A_0211/1/2886:2889,
1/1/2914:2916,
1/1/2930:2936
No text annotation
homologous
J3_8P9A_063
J3_62630.1
J3_8P9A_0221/1/3171:3176,
1/1/3212:3220,
1/1/3265:3279
No text annotation
homologous
J3_8P9A_064
J3_03190.1
J3_8P9A_0231/1/3298:3300,
1/1/3314:3320,
1/1/3387:3390
No text annotation
geometric
J3_5TBW_069
NA
J3_8P9A_0241/3/9:14,
1/3/66:67,
1/3/111:112
No text annotation
homologous
J3_8C3A_059
NA
J3_8P9A_0251/4/44:45,
1/4/58:64,
1/4/96:100
No text annotation
homologous
J3_8P4V_024
NA
J3_8P9A_0261/A/41:42,
1/A/433:439,
1/A/464:466
No text annotation
geometric
J3_4V88_078
NA
J3_8P9A_0271/A/41:48,
1/A/431:439,
1/A/464:466
No text annotation
homologous
J3_8P9A_069
J3_46317.4
J3_8P9A_0281/A/633:635,
1/A/861:865,
1/A/965:966
No text annotation
geometric
J3_4V88_080
NA
J3_8P9A_0291/A/633:635,
1/A/861:866,
1/A/962:966
No text annotation
homologous
J3_8P9A_072
J3_17385.4
J3_8P9A_0301/A/760:763,
1/A/773:775,
1/A/785:790
No text annotation
homologous
J3_8P9A_073
J3_97642.1
J3_8P9A_0311/A/881:884,
1/A/928:936,
1/A/943:947
No text annotation
homologous
J3_8P9A_074
J3_76375.1
J3_8P9A_0321/A/1037:1039,
1/A/1079:1083,
1/A/1090:1094
No text annotation
homologous
J3_8P9A_075
J3_94999.1
J3_8P9A_0331/A/1161:1164,
1/A/1581:1587,
1/A/1609:1616
No text annotation
homologous
J3_8C3A_038
NA
J3_8P9A_0341/A/1168:1171,
1/A/1468:1470,
1/A/1574:1577
No text annotation
homologous
J3_8P9A_077
J3_52655.4
J3_8P9A_0351/A/1180:1187,
1/A/1198:1209,
1/A/1454:1458
No text annotation
homologous
J3_8C3A_040
NA
J3_8P9A_0361/A/1215:1220,
1/A/1263:1267,
1/A/1442:1448
No text annotation
homologous
J3_8C3A_041
NA
J3_8P9A_0861/A/1283:1288,
1/A/1327:1332,
1/A/1419:1424
No text annotation
homologous
J3_8P9A_080
J3_99563.1
J3_8P9A_0381/A/1293:1294,
1/A/1303:1306,
1/A/1318:1322
No text annotation
homologous
J3_8C3A_085
NA
J3_8P9A_0391/A/1336:1338,
1/A/1386:1389,
1/A/1412:1415
No text annotation
geometric
J3_4V88_040
NA
J3_8P9A_0401/A/1336:1338,
1/A/1386:1391,
1/A/1407:1415
No text annotation
homologous
J3_8C3A_086
NA
J3_8P9A_0411/A/1470:1474,
1/A/1533:1540,
1/A/1571:1574
No text annotation
homologous
J3_8P9A_084
J3_37047.6
J3_8P9A_0421/AR/113:123,
1/AR/149:158,
1/AR/263:267
No text annotation
J3_19664.1
J3_8P9A_0431/AR/113:124,
1/AR/144:158,
1/AR/263:267
No text annotation
J3_58429.1
J3_8P9A_0441/AR/185:189,
1/AR/205:214,
1/AR/226:231
No text annotation
J3_75408.1
J3_8P9A_0451/AR/340:356,
1/AR/363:368,
1/AT/21:24
No text annotation
J3_30040.2
J3_8P9A_0461/AR/369:376,
1/AR/403:404,
1/AT/19:20
No text annotation
J3_60031.2
J3_8P9A_0471/AR/369:379,
1/AR/390:404,
1/AT/19:20
No text annotation
J3_92134.2
J3_8P9A_0481/AR/502:503,
1/AR/588:597,
1/AR/606:611
No text annotation
J3_83726.1
J3_8P9A_0491/AR/814:820,
1/AR/905:907,
1/AR/923:926
No text annotation
J3_64189.2
J3_8P9A_0501/AR/828:831,
1/AR/863:867,
1/AR/892:897
No text annotation
J3_21998.1
J3_8P9A_0511/AR/986:987,
1/AR/1062:1066,
1/AR/1092:1098
No text annotation
J3_09667.1
J3_8P9A_0521/AR/1230:1232,
1/AR/1256:1262,
1/AR/1277:1279
No text annotation
J3_28621.5
J3_8P9A_0531/AR/1479:1485,
1/AR/1857:1859,
1/AR/1871:1874
No text annotation
J3_19545.2
J3_8P9A_0541/AR/1488:1491,
1/AR/1837:1843,
1/AR/1852:1854
No text annotation
J3_19545.2
J3_8P9A_0551/AR/1526:1531,
1/AR/1591:1595,
1/AR/1612:1613
No text annotation
J3_31965.2
J3_8P9A_0561/AR/1537:1542,
1/AR/1551:1563,
1/AR/1577:1584
No text annotation
J3_38098.1
J3_8P9A_0871/AR/1631:1632,
1/AR/1641:1645,
1/AR/1810:1811
No text annotation
J3_75962.2
J3_8P9A_0581/AR/1654:1658,
1/AR/1791:1792,
1/AR/1796:1801
No text annotation
J3_12393.2
J3_8P9A_0591/AR/2432:2435,
1/AR/2512:2517,
1/AR/2590:2597
No text annotation
J3_84052.1
J3_8P9A_0601/AR/2529:2532,
1/AR/2547:2563,
1/AR/2578:2581
No text annotation
J3_28639.1
J3_8P9A_0611/AR/2651:2653,
1/AR/2754:2765,
1/AR/2793:2798
No text annotation
J3_20992.1
J3_8P9A_0621/AR/2664:2666,
1/AR/2690:2692,
1/AR/2701:2706
No text annotation
J3_61124.2
J3_8P9A_0631/AR/2886:2889,
1/AR/2914:2916,
1/AR/2930:2936
No text annotation
J3_62630.1
J3_8P9A_0641/AR/3171:3176,
1/AR/3212:3220,
1/AR/3265:3279
No text annotation
J3_03190.1
J3_8P9A_0651/AR/3298:3300,
1/AR/3314:3318,
1/AR/3388:3390
No text annotation
J3_81015.1
J3_8P9A_0661/AS/9:14,
1/AS/66:67,
1/AS/111:112
No text annotation
J3_12003.2
J3_8P9A_0671/AT/44:45,
1/AT/58:64,
1/AT/96:100
No text annotation
J3_35667.2
J3_8P9A_0681/sR/41:42,
1/sR/433:439,
1/sR/464:466
No text annotation
J3_67856.4
J3_8P9A_0691/sR/41:48,
1/sR/431:439,
1/sR/464:466
No text annotation
J3_46317.4
J3_8P9A_0701/sR/213:229,
1/sR/236:243,
1/sR/250:252
No text annotation
J3_69466.1
J3_8P9A_0711/sR/633:635,
1/sR/861:865,
1/sR/965:966
No text annotation
J3_56052.5
J3_8P9A_0721/sR/633:635,
1/sR/861:866,
1/sR/962:966
No text annotation
J3_17385.4
J3_8P9A_0731/sR/760:763,
1/sR/773:775,
1/sR/785:790
No text annotation
J3_97642.1
J3_8P9A_0741/sR/881:884,
1/sR/928:936,
1/sR/943:947
No text annotation
J3_76375.1
J3_8P9A_0751/sR/1037:1039,
1/sR/1079:1083,
1/sR/1090:1094
No text annotation
J3_94999.1
J3_8P9A_0761/sR/1161:1164,
1/sR/1581:1587,
1/sR/1609:1616
No text annotation
J3_25303.4
J3_8P9A_0771/sR/1168:1171,
1/sR/1468:1470,
1/sR/1574:1577
No text annotation
J3_52655.4
J3_8P9A_0781/sR/1180:1187,
1/sR/1198:1209,
1/sR/1454:1458
No text annotation
J3_83516.4
J3_8P9A_0791/sR/1215:1220,
1/sR/1263:1267,
1/sR/1442:1448
No text annotation
J3_87797.1
J3_8P9A_0801/sR/1283:1288,
1/sR/1327:1332,
1/sR/1419:1424
No text annotation
J3_99563.1
J3_8P9A_0811/sR/1293:1294,
1/sR/1303:1306,
1/sR/1318:1322
No text annotation
J3_76043.3
J3_8P9A_0821/sR/1336:1338,
1/sR/1386:1389,
1/sR/1412:1415
No text annotation
J3_82365.4
J3_8P9A_0831/sR/1336:1338,
1/sR/1386:1391,
1/sR/1407:1415
No text annotation
J3_88233.1
J3_8P9A_0841/sR/1470:1474,
1/sR/1533:1540,
1/sR/1571:1574
No text annotation
J3_37047.6
J4_8P9A_0011/1/112:113,
1/1/267:272,
1/1/293:299,
1/1/316:319
No text annotation
homologous
J4_8P9A_012
J4_45801.6
J4_8P9A_0021/1/185:189,
1/1/205:208,
1/1/212:214,
1/1/226:231
No text annotation
homologous
J4_8P9A_013
J4_12410.1
J4_8P9A_0031/1/1451:1457,
1/1/1475:1476,
1/1/1877:1880,
1/1/2352:2353
No text annotation
homologous
J4_8P9A_014
J4_87855.1
J4_8P9A_0041/1/1492:1496,
1/1/1520:1525,
1/1/1614:1615,
1/1/1829:1836
No text annotation
homologous
J4_8P9A_015
J4_69051.6
J4_8P9A_0051/1/1674:1675,
1/1/1693:1694,
1/1/1752:1753,
1/1/1772:1773
No text annotation
homologous
J4_8P9A_016
J4_24280.2
J4_8P9A_0061/1/2130:2134,
1/1/2146:2150,
1/1/2186:2190,
1/1/2317:2322
No text annotation
homologous
J4_8P9A_017
J4_07509.2
J4_8P9A_0071/1/2192:2194,
1/1/2248:2249,
1/1/2267:2276,
1/1/2310:2315
No text annotation
homologous
J4_8C3A_007
NA
J4_8P9A_0081/1/2654:2658,
1/1/2712:2716,
1/1/2740:2742,
1/1/2751:2753
No text annotation
homologous
J4_8P9A_019
J4_04930.6
J4_8P9A_0091/1/3010:3012,
1/1/3042:3043,
1/1/3098:3100,
1/1/3134:3136
No text annotation
homologous
J4_8P9A_020
J4_65356.1
J4_8P9A_0101/A/99:107,
1/A/307:309,
1/A/357:361,
1/A/383:384
No text annotation
homologous
J4_8P9A_021
J4_15241.1
J4_8P9A_0111/A/622:624,
1/A/975:980,
1/A/1021:1032,
1/A/1103:1104
No text annotation
homologous
J4_8P9A_022
J4_61885.6
J4_8P9A_0121/AR/112:113,
1/AR/267:272,
1/AR/293:299,
1/AR/316:319
No text annotation
J4_45801.6
J4_8P9A_0131/AR/185:189,
1/AR/205:208,
1/AR/212:214,
1/AR/226:231
No text annotation
J4_12410.1
J4_8P9A_0141/AR/1451:1457,
1/AR/1475:1476,
1/AR/1877:1880,
1/AR/2352:2353
No text annotation
J4_87855.1
J4_8P9A_0151/AR/1492:1496,
1/AR/1520:1525,
1/AR/1614:1615,
1/AR/1829:1836
No text annotation
J4_69051.6
J4_8P9A_0161/AR/1674:1675,
1/AR/1693:1694,
1/AR/1752:1753,
1/AR/1772:1773
No text annotation
J4_24280.2
J4_8P9A_0171/AR/2130:2134,
1/AR/2146:2150,
1/AR/2186:2190,
1/AR/2317:2322
No text annotation
J4_07509.2
J4_8P9A_0181/AR/2192:2194,
1/AR/2248:2249,
1/AR/2267:2276,
1/AR/2310:2315
No text annotation
J4_93343.1
J4_8P9A_0191/AR/2654:2658,
1/AR/2712:2716,
1/AR/2740:2742,
1/AR/2751:2753
No text annotation
J4_04930.6
J4_8P9A_0201/AR/3010:3012,
1/AR/3042:3043,
1/AR/3098:3100,
1/AR/3134:3136
No text annotation
J4_65356.1
J4_8P9A_0211/sR/99:107,
1/sR/307:309,
1/sR/357:361,
1/sR/383:384
No text annotation
J4_15241.1
J4_8P9A_0221/sR/622:624,
1/sR/975:980,
1/sR/1021:1032,
1/sR/1103:1104
No text annotation
J4_61885.6
J5_8P9A_0011/1/20:22,
1/4/35:42,
1/4/102:107,
1/4/115:116,
1/4/137:139
No text annotation
homologous
J5_8P9A_010
J5_01737.2
J5_8P9A_0021/1/658:663,
1/1/799:802,
1/1/941:944,
1/1/1375:1376,
1/1/1431:1437
No text annotation
homologous
J5_8P9A_011
J5_63811.1
J5_8P9A_0031/1/675:678,
1/1/702:706,
1/1/713:721,
1/1/749:751,
1/1/782:787
No text annotation
homologous
J5_8P9A_012
J5_23272.1
J5_8P9A_0041/1/1906:1914,
1/1/1938:1939,
1/1/2109:2110,
1/1/2114:2122,
1/1/2331:2333
No text annotation
homologous
J5_8P9A_013
J5_62523.6
J5_8P9A_0051/1/2399:2406,
1/1/2815:2823,
1/1/2867:2876,
1/1/2951:2957,
1/1/2975:2980
No text annotation
J5_8P9A_0061/1/2416:2419,
1/1/2611:2614,
1/1/2627:2628,
1/1/2650:2651,
1/1/2798:2804
No text annotation
homologous
J5_8P9A_015
J5_08912.1
J5_8P9A_0071/A/31:35,
1/A/473:483,
1/A/504:516,
1/A/536:546,
1/A/592:595
No text annotation
J5_8P9A_0081/A/54:57,
1/A/90:97,
1/A/386:388,
1/A/409:411,
1/A/422:426
No text annotation
homologous
J5_8P9A_017
J5_59910.6
J5_8P9A_0191/A/636:641,
1/A/693:698,
1/A/740:744,
1/A/807:817,
1/A/854:860
No text annotation
J5_8P9A_0101/AR/20:22,
1/AT/35:42,
1/AT/102:107,
1/AT/115:116,
1/AT/137:139
No text annotation
J5_01737.2
J5_8P9A_0111/AR/658:663,
1/AR/799:802,
1/AR/941:944,
1/AR/1375:1376,
1/AR/1431:1437
No text annotation
J5_63811.1
J5_8P9A_0121/AR/675:678,
1/AR/702:706,
1/AR/713:721,
1/AR/749:751,
1/AR/782:787
No text annotation
J5_23272.1
J5_8P9A_0131/AR/1906:1914,
1/AR/1938:1939,
1/AR/2109:2110,
1/AR/2114:2122,
1/AR/2331:2333
No text annotation
J5_62523.6
J5_8P9A_0141/AR/2399:2406,
1/AR/2815:2823,
1/AR/2867:2875,
1/AR/2952:2957,
1/AR/2975:2980
No text annotation
J5_14788.1
J5_8P9A_0151/AR/2416:2419,
1/AR/2611:2614,
1/AR/2627:2628,
1/AR/2650:2651,
1/AR/2798:2804
No text annotation
J5_08912.1
J5_8P9A_0161/sR/31:35,
1/sR/473:479,
1/sR/509:516,
1/sR/536:546,
1/sR/592:595
No text annotation
J5_02492.1
J5_8P9A_0171/sR/54:57,
1/sR/90:97,
1/sR/386:388,
1/sR/409:411,
1/sR/422:426
No text annotation
J5_59910.6
J5_8P9A_0181/sR/636:641,
1/sR/693:698,
1/sR/740:744,
1/sR/807:817,
1/sR/854:860
No text annotation
J5_47977.1
J6_8P9A_0011/1/22:28,
1/1/56:68,
1/1/75:79,
1/1/106:110,
1/1/321:331,
1/4/32:35
No text annotation
J6_8P9A_0021/1/2416:2419,
1/1/2611:2614,
1/1/2627:2628,
1/1/2650:2653,
1/1/2754:2765,
1/1/2793:2804
No text annotation
J6_8P9A_0031/AR/22:27,
1/AR/58:68,
1/AR/75:79,
1/AR/106:110,
1/AR/321:331,
1/AT/32:35
No text annotation
J6_51798.1
J6_8P9A_0041/AR/2416:2419,
1/AR/2611:2614,
1/AR/2627:2628,
1/AR/2650:2653,
1/AR/2754:2765,
1/AR/2793:2804
No text annotation
J6_99438.1
J7_8P9A_0011/1/949:954,
1/1/967:968,
1/1/1114:1117,
1/1/1141:1146,
1/1/1157:1161,
1/1/1338:1339,
1/1/1365:1370
No text annotation
J7_8P9A_0021/AR/949:954,
1/AR/967:968,
1/AR/1114:1117,
1/AR/1141:1146,
1/AR/1157:1161,
1/AR/1338:1339,
1/AR/1365:1370
No text annotation
J7_22176.1

Problematic loops

#loop idProblemSequence
J3_8P9A_015No text annotation
J3_8P9A_037No text annotation
J3_8P9A_057No text annotation
J5_8P9A_009No text annotation

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