HL_8P9A_117

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUGGAACA

Length

8 nucleotides

Bulged bases

8P9A|1|AR|C|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01609.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

18

Unit IDs

8P9A|1|AR|U|194
8P9A|1|AR|U|195
8P9A|1|AR|G|196
8P9A|1|AR|G|197
8P9A|1|AR|A|198
8P9A|1|AR|A|199
8P9A|1|AR|C|200
8P9A|1|AR|A|201

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain DA

60S ribosomal protein L26-A

Chain DG

60S ribosomal protein L32