HL_8P9A_144

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AGCAGUU

Length

7 nucleotides

Bulged bases

8P9A|1|AR|G|1507, 8P9A|1|AR|U|1511

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_57176.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

14

Unit IDs

8P9A|1|AR|A|1506
8P9A|1|AR|G|1507
8P9A|1|AR|C|1508
8P9A|1|AR|A|1509
8P9A|1|AR|G|1510
8P9A|1|AR|U|1511
8P9A|1|AR|U|1512

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain CR

60S ribosomal protein L17-A

Chain CT

60S ribosomal protein L19-A

Chain DN

60S ribosomal protein L39