HL_8P9A_157

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UCUAAUUAAAA

Length

11 nucleotides

Bulged bases

8P9A|1|AR|A|2138, 8P9A|1|AR|A|2139, 8P9A|1|AR|U|2140, 8P9A|1|AR|A|2144

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01962.2

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

8P9A|1|AR|U|2135
8P9A|1|AR|C|2136
8P9A|1|AR|U|2137
8P9A|1|AR|A|2138
8P9A|1|AR|A|2139
8P9A|1|AR|U|2140
8P9A|1|AR|U|2141
8P9A|1|AR|A|2142
8P9A|1|AR|A|2143
8P9A|1|AR|A|2144
8P9A|1|AR|A|2145

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain CD

60S ribosomal protein L2-A

Chain DL

60S ribosomal protein L37-A