3D structure

PDB id
8P9A (explore in PDB, NAKB, or RNA 3D Hub)
Description
80S yeast ribosome in complex with Methyllissoclimide
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
UGAUCA
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_65794.5
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
14

Unit IDs

8P9A|1|AR|U|3068
8P9A|1|AR|G|3069
8P9A|1|AR|A|3070
8P9A|1|AR|U|3071
8P9A|1|AR|C|3072
8P9A|1|AR|A|3073

Current chains

Chain AR
25S ribosomal RNA

Nearby chains

Chain CT
60S ribosomal protein L19-A
Chain CW
60S ribosomal protein L22-A
Chain DF
60S ribosomal protein L31-A

Coloring options:

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