HL_8P9A_192

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUAAUUC

Length

7 nucleotides

Bulged bases

8P9A|1|sR|U|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

8P9A|1|sR|G|154
8P9A|1|sR|U|155
8P9A|1|sR|A|156
8P9A|1|sR|A|157
8P9A|1|sR|U|158
8P9A|1|sR|U|159
8P9A|1|sR|C|160

Current chains

Chain sR

16S ribosomal RNA

Nearby chains

Chain d4

40S ribosomal protein S24-A

Chain s6

40S ribosomal protein S6-A