HL_8P9A_198

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UAAGGG

Length

6 nucleotides

Bulged bases

8P9A|1|sR|A|369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8P9A|1|sR|U|368
8P9A|1|sR|A|369
8P9A|1|sR|A|370
8P9A|1|sR|G|371
8P9A|1|sR|G|372
8P9A|1|sR|G|373

Current chains

Chain sR

16S ribosomal RNA

Nearby chains

Chain c1

40S ribosomal protein S11-A

Chain d2

40S ribosomal protein S22-A

Chain d3

40S ribosomal protein S23-A

Chain s2

40S ribosomal protein S2

Chain s9

40S ribosomal protein S9-A