HL_8PEG_006

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

8PEG|1|7|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PEG_006 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.0947

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8PEG|1|7|G|194
8PEG|1|7|A|195
8PEG|1|7|A|196
8PEG|1|7|A|197
8PEG|1|7|C|198
8PEG|1|7|A|199
8PEG|1|7|U|200
8PEG|1|7|C|201

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L28

Chain X

Transfer RNA; tRNA

Chain o

50S ribosomal protein L15